RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TMEM198Q66K66 360 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 ARCQ7LC44 396 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 CMC1Q7Z7K0 106 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 DQX1Q8TE96 717 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 DHX35Q9H5Z1 703 aaKnown RBP12.45□□□□□ -0.42
VDR-208ENST00000550325 CROCCQ5TZA2 2017 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 TAF1LQ8IZX4 1826 aa12.45□□□□□ -0.42
VDR-208ENST00000550325 APOC4-APOC2K7ER74 178 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 ZC3H11AO75152 810 aaKnown RBP eCLIP12.44□□□□□ -0.42
VDR-208ENST00000550325 APOC2P02655 101 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 MIPP30301 263 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 SPP2Q13103 211 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 ITGADQ13349 1161 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 LRRC38Q5VT99 294 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 IL23RQ5VWK5 629 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 NETO2Q8NC67 525 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 ADCY4Q8NFM4 1077 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 LRTOMTQ8WZ04 291 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 PPP1R14BQ96C90 147 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 NPAS2Q99743 824 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 MSTO1Q9BUK6 570 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 WDR27A2RRH5 827 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 SAC3D1A6NKF1 404 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 VNN1O95497 513 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 IL1BP01584 269 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 ZNF24P17028 368 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 ACO1P21399 889 aaKnown RBP12.44□□□□□ -0.42
VDR-208ENST00000550325 NFKBIAP25963 317 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 PIK3R1P27986 724 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 ADORA2AP29274 412 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 OSTNP61366 133 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 MRPS9P82933 396 aaKnown RBP12.44□□□□□ -0.42
VDR-208ENST00000550325 ZACNQ401N2 412 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 TTC33Q6PID6 262 aaPredicted RBP12.44□□□□□ -0.42
VDR-208ENST00000550325 DBNDD1Q9H9R9 158 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 WDR41Q9HAD4 459 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 POPDC2Q9HBU9 364 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 TMEM216Q9P0N5 145 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 K7EPI3 171 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 BIRC5O15392 142 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 RNASEH2AO75792 299 aaKnown RBP12.44□□□□□ -0.42
VDR-208ENST00000550325 H6PDO95479 791 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 CRKP46108 304 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 BCAR1P56945 870 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 JAG1P78504 1218 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 TRPC3Q13507 836 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 ADRM1Q16186 407 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 TMEM132AQ24JP5 1023 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 UBR7Q8N806 425 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 C12orf43Q96C57 262 aaKnown RBP12.44□□□□□ -0.42
VDR-208ENST00000550325 RIT2Q99578 217 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 PCDHAC1Q9H158 963 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 AFG3L2Q9Y4W6 797 aa12.44□□□□□ -0.42
VDR-208ENST00000550325 NOL3O60936 208 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 CSDE1O75534 798 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 MAPTP10636 758 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 ME2P23368 584 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 HMOX2P30519 316 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 GABRB2P47870 512 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 HSPA13P48723 471 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 BNIP3Q12983 259 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 AMIGO3Q86WK7 504 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 TDRD5Q8NAT2 981 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 CASP10Q92851 521 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 GPATCH1Q9BRR8 931 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 NGRNQ9NPE2 291 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 PLK2Q9NYY3 685 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 PAK5Q9P286 719 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 NFASCO94856 1347 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 C1orf232A0A0U1RR37 186 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 A0A1W2PPW3 197 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 CPA3P15088 417 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 CKMT2P17540 419 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 TFE3P19532 575 aaPredicted RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 TFAMQ00059 246 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 GSTM4Q03013 218 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 DENND1BQ6P3S1 775 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 Q6ZNX1 250 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 KIAA0319LQ8IZA0 1049 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 FERMT1Q9BQL6 677 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 RTKNQ9BST9 563 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 UNKQ9C0B0 810 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 GABBR1Q9UBS5 961 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 USP18Q9UMW8 372 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 FUOMA2VDF0 154 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 AKAP10O43572 662 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 GLRA3O75311 464 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 CCDC130P13994 396 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 ZNF23P17027 643 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 CCR10P46092 362 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 KCNJ11Q14654 390 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 NEDD8Q15843 81 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms