RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PIK3R6Q5UE93 754 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 NAA35Q5VZE5 725 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 NADSYN1Q6IA69 706 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 ERICH1Q86X53 443 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 ZNF557Q8N988 423 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 UCMAQ8WVF2 138 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 C18orf8Q96DM3 657 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 BTN2A3PQ96KV6 586 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 PRICKLE1Q96MT3 831 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 TPSD1Q9BZJ3 242 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 BCCIPQ9P287 314 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 HCN2Q9UL51 889 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 CEP192Q8TEP8 1941 aa17.89■□□□□ 0.45
CHMP1A-208ENST00000550102 TCRBV21S2A2A0A5A6 115 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 NPC1O15118 1278 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 TBL1XO60907 577 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 GBP1P32455 592 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 GABRB2P47870 512 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 FILIP1LQ4L180 1135 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 ZC3H12AQ5D1E8 599 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 FAM102AQ5T9C2 384 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 RNF43Q68DV7 783 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 TRIM72Q6ZMU5 477 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 CACNA2D4Q7Z3S7 1137 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 FAM160A2Q8N612 972 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 WFIKKN2Q8TEU8 576 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 HMGB4Q8WW32 186 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 ACOX2Q99424 681 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 GABRG3Q99928 467 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 CIPCQ9C0C6 399 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 NUCKS1Q9H1E3 243 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 CACNA2D2Q9NY47 1150 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 RRN3Q9NYV6 651 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 CLEC4EQ9ULY5 219 aa17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 TNRC6BQ9UPQ9 1833 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-208ENST00000550102 SYNJ2BP-COX16A0A087WUM0 186 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 GOLGA6L7A0A1B0GV03 622 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 RETP07949 1114 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 CCR1P32246 355 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 NOS2P35228 1153 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 MATKP42679 507 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 WASP42768 502 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 TPM4P67936 248 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 FMO1Q01740 532 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 IQCB1Q15051 598 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 USP39Q53GS9 565 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 KBTBD6Q86V97 674 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 C11orf74Q86VG3 221 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 CHSY1Q86X52 802 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 XYLT1Q86Y38 959 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 DCLK2Q8N568 766 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.87■□□□□ 0.455e-6■■□□□ 13.3
CHMP1A-208ENST00000550102 ATP6V0D2Q8N8Y2 350 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 CPA5Q8WXQ8 436 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 RNF34Q969K3 372 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 RTN4Q9NQC3 1192 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 ABCB8Q9NUT2 735 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 COX16Q9P0S2 106 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 SLC12A6Q9UHW9 1150 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 GGA2Q9UJY4 613 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 STAP1Q9ULZ2 295 aa17.87■□□□□ 0.45
CHMP1A-208ENST00000550102 ABCA7Q8IZY2 2146 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 FAM170AA1A519 330 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 ZBTB24O43167 697 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 PABPC1P11940 636 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 ABCB4P21439 1286 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 HLA-FP30511 346 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 ARID5AQ03989 594 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 MTA1Q13330 715 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 EIF4EBP2Q13542 120 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 STARD3Q14849 445 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 ELF2Q15723 593 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 MS4A13Q5J8X5 152 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 MFN1Q8IWA4 741 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 CCDC117Q8IWD4 279 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 AHI1Q8N157 1196 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 GPR161Q8N6U8 529 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 SPACA7Q96KW9 195 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 ELOVL2Q9NXB9 296 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 STIM2Q9P246 746 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 XPO7Q9UIA9 1087 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 STON1Q9Y6Q2 735 aa17.86■□□□□ 0.45
CHMP1A-208ENST00000550102 A0A1W2PQF6 199 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 KCNU1A8MYU2 1149 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 F5H5T6 163 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 GOLGA8SH3BPF8 625 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 M0QYT0 321 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 TEX33O43247 280 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 TIMM44O43615 452 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 LRP3O75074 770 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 CAVIN2O95810 425 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 CYP1A1P04798 512 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 CHRNB2P17787 502 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 TACR2P21452 398 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 RNASE9P60153 205 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 RPS24P62847 133 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 NME3Q13232 169 aa17.85■□□□□ 0.45
CHMP1A-208ENST00000550102 CDH18Q13634 790 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms