RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 LRRC38Q5VT99 294 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 PPIL6Q8IXY8 311 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 PYROXD2Q8N2H3 581 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 CPSF2Q9P2I0 782 aaKnown RBP11.45□□□□□ -0.58
LINC00661-204ENST00000549354 SCOCQ9UIL1 159 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
LINC00661-204ENST00000549354 ZBED1O96006 694 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 RPLP2P05387 115 aaKnown RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 TCN1P20061 433 aaPredicted RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 PAPOLAP51003 745 aaKnown RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 CACNA2D1P54289 1103 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 AQP5P55064 265 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 HADHQ16836 314 aaKnown RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 EFHC2Q5JST6 749 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 NDUFAF2Q8N183 169 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 TEX9Q8N6V9 391 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 BANPQ8N9N5 519 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 DCAKDQ8WVC6 231 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 RXFP2Q8WXD0 754 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 OXNAD1Q96HP4 312 aaPredicted RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 EBF4Q9BQW3 602 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 KCNK13Q9HB14 408 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 PCDH9Q9HC56 1237 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 ABT1Q9ULW3 272 aaKnown RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 USP18Q9UMW8 372 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 TRIP12Q14669 1992 aaPredicted RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 GOLGA8QA0A0J9YX86 632 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 GOLGA8OA6NCC3 632 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 DCAF8L1A6NGE4 600 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 GOLGA8NF8WBI6 632 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 SMAPO00193 183 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 ADAMTS4O75173 837 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 CYP3A5P20815 502 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 CST5P28325 142 aaPredicted RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 FLT3LGP49771 235 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 WASHC2DQ5SRD0 308 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 RASIP1Q5U651 963 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 CCSAPQ6IQ19 270 aaPredicted RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 FAM131BQ86XD5 332 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 TP53INP2Q8IXH6 220 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 TNS4Q8IZW8 715 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 SPATA6LQ8N4H0 392 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 SNX31Q8N9S9 440 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 RBM15BQ8NDT2 890 aaKnown RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 KLHDC9Q8NEP7 349 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 OR6B3Q8NGW1 331 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 PYDC1Q8WXC3 89 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 AZIN2Q96A70 460 aa11.44□□□□□ -0.58
LINC00661-204ENST00000549354 SRPK1Q96SB4 655 aaKnown RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 ZC3H7BQ9UGR2 993 aaKnown RBP11.44□□□□□ -0.58
LINC00661-204ENST00000549354 PIRO00625 290 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 PPEF2O14830 753 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 CFLARO15519 480 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 PRPSAP2O60256 369 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 MT-CO1P00395 513 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SKIP12755 728 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 BCAR1P56945 870 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 MRPS35P82673 323 aaKnown RBP11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SLC25A3Q00325 362 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 BST1Q10588 318 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 NME3Q13232 169 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 PPM1JQ5JR12 505 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 C1orf146Q5VVC0 180 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 IZUMO2Q6UXV1 221 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 DENND5BQ6ZUT9 1274 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 BEST2Q8NFU1 509 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 FNIP1Q8TF40 1166 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 VPS11Q9H270 941 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SENP1Q9P0U3 644 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 WDR35Q9P2L0 1181 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SLC24A2Q9UI40 661 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 UBQLN1Q9UMX0 589 aaKnown RBP11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SHOC2Q9UQ13 582 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SIGLEC16A6NMB1 481 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 KCNK1O00180 336 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 MAP3K7O43318 606 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 CAPN15O75808 1086 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 RECQL4O94761 1208 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 CDK16Q00536 496 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 LCLAT1Q6UWP7 414 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 ZNF276Q8N554 614 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 NXF3Q9H4D5 531 aaKnown RBP11.43□□□□□ -0.58
LINC00661-204ENST00000549354 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 GOLGA2P5Q9HBQ8 144 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 CYLDQ9NQC7 956 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 WFS1O76024 890 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 DLDP09622 509 aaKnown RBP11.43□□□□□ -0.58
LINC00661-204ENST00000549354 KDELR1P24390 212 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 GPD2P43304 727 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 MRPS6P82932 125 aaKnown RBP11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SLC34A1Q06495 639 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 NOGQ13253 232 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 STILQ15468 1287 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 GNASQ5JWF2 1037 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 C9orf57Q5W0N0 161 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 ADGRD1Q6QNK2 874 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SERINC5Q86VE9 423 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 SMG8Q8ND04 991 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms