RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 USP9XQ93008 2570 aaPredicted RBP12.79□□□□□ -0.36
DDX54-206ENST00000549271 PLXNA2O75051 1894 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 ENC1O14682 589 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 RFPL3O75679 317 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 BEST1O76090 585 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 C6P13671 934 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 ACO1P21399 889 aaKnown RBP12.79□□□□□ -0.36
DDX54-206ENST00000549271 CTSKP43235 329 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 ASPAP45381 313 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 DGKGP49619 791 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 PGFP49763 221 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 VAMP7P51809 220 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 NDST1P52848 882 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 COPAP53621 1224 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 PPP3CAQ08209 521 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 INCA1Q0VD86 236 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 KCNH2Q12809 1159 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 ORC1Q13415 861 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 TEAD4Q15561 434 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 EDRF1Q3B7T1 1238 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 TBC1D25Q3MII6 688 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 KCNT1Q5JUK3 1230 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 HES3Q5TGS1 186 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 ZNF658Q5TYW1 1059 aaPredicted RBP12.79□□□□□ -0.36
DDX54-206ENST00000549271 SCARA5Q6ZMJ2 495 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 C6orf106Q9H6K1 298 aaPredicted RBP12.79□□□□□ -0.36
DDX54-206ENST00000549271 WDR35Q9P2L0 1181 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 FBXO10Q9UK96 956 aa12.79□□□□□ -0.36
DDX54-206ENST00000549271 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.79□□□□□ -0.36
DDX54-206ENST00000549271 HHLA1C9JL84 531 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 CBX4O00257 560 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 NPC1O15118 1278 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 SMC2O95347 1197 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 HLA-DRAP01903 254 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 FAM200BP0CF97 657 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 TRIM49P0CI25 452 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 TRIM49CP0CI26 452 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 CCDC130P13994 396 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 TRIM21P19474 475 aaKnown RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 RPL13P26373 211 aaKnown RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 ACTN2P35609 894 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 PSMC2P35998 433 aaKnown RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 ATP5C1P36542 298 aaKnown RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 GCLMP48507 274 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 ACADVLP49748 655 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 PMS1P54277 932 aaKnown RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 IL9RQ01113 521 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 DNAJC3Q13217 504 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 LY6DQ14210 128 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 LAYNQ6UX15 382 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 INTS8Q75QN2 995 aaKnown RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 ZC3H3Q8IXZ2 948 aaKnown RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 FAM186BQ8IYM0 893 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 C12orf29Q8N999 325 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 SNX19Q92543 992 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 TTC9Q92623 222 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 PRCCQ92733 491 aaPredicted RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 SMARCE1Q969G3 411 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 EEF2KMTQ96G04 330 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 NACA2Q9H009 215 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 CYP3A43Q9HB55 503 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 RMND1Q9NWS8 449 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 HMGXB4Q9UGU5 601 aa12.78□□□□□ -0.36
DDX54-206ENST00000549271 ARID1BQ8NFD5 2236 aaPredicted RBP12.78□□□□□ -0.36
DDX54-206ENST00000549271 FLNCQ14315 2725 aa12.77□□□□□ -0.36
DDX54-206ENST00000549271 DOPEY2Q9Y3R5 2298 aa12.77□□□□□ -0.36
DDX54-206ENST00000549271 A0A1B0GTQ1 180 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 SLC28A2O43868 658 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 DFNA5O60443 496 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 LDOC1O95751 146 aaPredicted RBP12.77□□□□□ -0.37
DDX54-206ENST00000549271 TBX18O95935 607 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 C7P10643 843 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 IRF1P10914 325 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 CSRP3P50461 194 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 GOLGA8FQ08AF8 430 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 GOLGA8DPQ0D2H9 430 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 ANKRD40Q6AI12 368 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 SPOPLQ6IQ16 392 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 TPGS1Q6ZTW0 290 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 TAS1R2Q8TE23 839 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 TSC1Q92574 1164 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 P2RY11Q96G91 374 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 CNDP2Q96KP4 475 aaKnown RBP12.77□□□□□ -0.37
DDX54-206ENST00000549271 APOBEC3GQ9HC16 384 aaKnown RBP12.77□□□□□ -0.37
DDX54-206ENST00000549271 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.371e-10■■■■■ 74.5
DDX54-206ENST00000549271 OSER1Q9NX31 292 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 LSM7Q9UK45 103 aaKnown RBP12.77□□□□□ -0.37
DDX54-206ENST00000549271 MAN1B1Q9UKM7 699 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 SLC27A6Q9Y2P4 619 aa12.77□□□□□ -0.37
DDX54-206ENST00000549271 ACADMP11310 421 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 KRT13P13646 458 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
DDX54-206ENST00000549271 BMP6P22004 513 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 ACSL1P33121 698 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms