RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 WASH3PC4AMC7 463 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 E5RJQ4 531 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 PAPSS1O43252 624 aaPredicted RBP11.83□□□□□ -0.52
BEST3-209ENST00000548658 TSPAN3O60637 253 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 NDUFS2O75306 463 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 CALCAP01258 141 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 APOEP02649 317 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 FYNP06241 537 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 TPM2P07951 284 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 HLA-FP30511 346 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 IL12RB1P42701 662 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 ZNF234Q14588 700 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 DAB2IPQ5VWQ8 1189 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 KIAA1211LQ6NV74 962 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 GJB7Q6PEY0 223 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
BEST3-209ENST00000548658 HJURPQ8NCD3 748 aaPredicted RBP11.83□□□□□ -0.52
BEST3-209ENST00000548658 PRCCQ92733 491 aaPredicted RBP11.83□□□□□ -0.52
BEST3-209ENST00000548658 FOXJ1Q92949 421 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 P2RY11Q96G91 374 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 SLC39A13Q96H72 371 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 NUSAP1Q9BXS6 441 aaKnown RBP11.83□□□□□ -0.52
BEST3-209ENST00000548658 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 LMBRD1Q9NUN5 540 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.52
BEST3-209ENST00000548658 ASNSD1Q9NWL6 643 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 MBD1Q9UIS9 605 aaPredicted RBP11.83□□□□□ -0.52
BEST3-209ENST00000548658 CLEC4EQ9ULY5 219 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 RAD54BQ9Y620 910 aa11.83□□□□□ -0.52
BEST3-209ENST00000548658 NUP205Q92621 2012 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 PLXND1Q9Y4D7 1925 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 CACNA1AO00555 2505 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 IGHV1OR15-9A0A0B4J2B8 117 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 MED19A0JLT2 244 aaPredicted RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 LNP1A1A4G5 178 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 KCNJ18B7U540 433 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FOXN3O00409 490 aaPredicted RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 PES1O00541 588 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 TBL1XO60907 577 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 HSF2BPO75031 334 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 TRUB2O95900 331 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 EPHX1P07099 455 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 DLDP09622 509 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 ACADMP11310 421 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 PABPC1P11940 636 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 POLR2EP19388 210 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 OXTRP30559 389 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 PTGER3P43115 390 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 CDK17Q00537 523 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 ZNF33AQ06730 810 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 KCNJ12Q14500 433 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FUT11Q495W5 492 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 DCAF6Q58WW2 860 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FAM133BQ5BKY9 247 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 TCP11X2Q5H9J9 407 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 PPM1JQ5JR12 505 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 MIIPQ5JXC2 388 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 SYCP2LQ5T4T6 812 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 SYPL2Q5VXT5 272 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 SLC23A3Q6PIS1 610 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 KIAA1324Q6UXG2 1013 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 CHST9Q7L1S5 443 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 KIAA0907Q7Z7F0 614 aaPredicted RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 TMPRSS6Q8IU80 811 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 ZDHHC17Q8IUH5 632 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 MFN1Q8IWA4 741 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FAM71AQ8IYT1 594 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FRMD1Q8N878 549 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 ENOX1Q8TC92 643 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 SIPA1Q96FS4 1042 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 BTN2A3PQ96KV6 586 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FCRL2Q96LA5 508 aaPredicted RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 LSM14BQ9BX40 385 aaKnown RBP11.82□□□□□ -0.52
BEST3-209ENST00000548658 PDCL3Q9H2J4 239 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 SMOC1Q9H4F8 434 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 SYNCQ9H7C4 482 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 FBRSQ9HAH7 460 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 ACP6Q9NPH0 428 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 TMEM9BQ9NQ34 198 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 ITM2CQ9NQX7 267 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 ABCB8Q9NUT2 735 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 TJP2Q9UDY2 1190 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 GGA2Q9UJY4 613 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 PILRBQ9UKJ0 227 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 DNAH14Q0VDD8 3507 aa11.82□□□□□ -0.52
BEST3-209ENST00000548658 TM4SF5O14894 197 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 MOCS3O95396 460 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 ASLP04424 464 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 ABCB4P21439 1286 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 CD6P30203 668 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 SLC6A4P31645 630 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 CCR1P32246 355 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 CLCN1P35523 988 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 IRX4P78413 519 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 CDH18Q13634 790 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 DUOXA1Q1HG43 343 aa11.81□□□□□ -0.52
BEST3-209ENST00000548658 TRIM61Q5EBN2 209 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms