RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SMPD4Q9NXE4 827 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 NME7Q9Y5B8 376 aa14.74□□□□□ -0.05
PTCH1-217ENST00000548420 CELSR2Q9HCU4 2923 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 PPP1R3GB7ZBB8 358 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 CETN3O15182 167 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 HCRTO43612 131 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 PHACTR2O75167 634 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 GRIK1P39086 918 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 PPP1R2P41236 205 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 GRIA4P48058 902 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 ERVPABLB-1P60509 514 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 GABREP78334 506 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 SLC7A9P82251 487 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 SKOR1P84550 965 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 FKBP3Q00688 224 aaKnown RBP14.73□□□□□ -0.05
PTCH1-217ENST00000548420 LRRC63Q05C16 580 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 PPP3CAQ08209 521 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 SGSM1Q2NKQ1 1148 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 INAVAQ3KP66 663 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 ARL13BQ3SXY8 428 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 FUT11Q495W5 492 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 FAM26EQ8N5C1 309 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 SAP25Q8TEE9 199 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 SNX19Q92543 992 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 C6orf106Q9H6K1 298 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-217ENST00000548420 DEC1Q9P2X7 70 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 PLEKHB1Q9UF11 243 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-217ENST00000548420 GTF3C4Q9UKN8 822 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 CDH9Q9ULB4 789 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 CPQQ9Y646 472 aa14.73□□□□□ -0.05
PTCH1-217ENST00000548420 MT-CO3P00414 261 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 ASS1P00966 412 aaKnown RBP14.72□□□□□ -0.05
PTCH1-217ENST00000548420 IGLV3-19P01714 112 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 FAM87AP0C7U9 286 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 ACAT1P24752 427 aaKnown RBP14.72□□□□□ -0.05
PTCH1-217ENST00000548420 GTF2H1P32780 548 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 GNL1P36915 607 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-217ENST00000548420 FOXK1P85037 733 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 GAD2Q05329 585 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 BIRC3Q13489 604 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 CFAP221Q4G0U5 840 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 ISM2Q6H9L7 571 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 CCDC81Q6ZN84 652 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 KIAA1958Q8N8K9 716 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 TAF4BQ92750 862 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 EXTL1Q92935 676 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 FUBP3Q96I24 572 aaKnown RBP eCLIP14.72□□□□□ -0.05
PTCH1-217ENST00000548420 MMS19Q96T76 1030 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 MRPL45Q9BRJ2 306 aaKnown RBP14.72□□□□□ -0.05
PTCH1-217ENST00000548420 ORAI3Q9BRQ5 295 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 LRRC4CQ9HCJ2 640 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 OSGEPQ9NPF4 335 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 CRTAC1Q9NQ79 661 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 KIAA1468Q9P260 1216 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 CFAP97Q9P2B7 532 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 CSMD1Q96PZ7 3565 aa14.72□□□□□ -0.05
PTCH1-217ENST00000548420 SLC9A3R1O14745 358 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-217ENST00000548420 SLC16A3O15427 465 aaKnown RBP14.71□□□□□ -0.05
PTCH1-217ENST00000548420 HOXC11O43248 304 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-217ENST00000548420 ATP2C2O75185 946 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 OLFM2O95897 454 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 PDGFRBP09619 1106 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 KRT13P13646 458 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 TNNC1P63316 161 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 TEAD4Q15561 434 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 ZNF699Q32M78 642 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 SDE2Q6IQ49 451 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 TTI2Q6NXR4 508 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 TMEM25Q86YD3 366 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 EEF2KMTQ96G04 330 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 IPO9Q96P70 1041 aaKnown RBP14.71□□□□□ -0.05
PTCH1-217ENST00000548420 TSG101Q99816 390 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 DUSP9Q99956 384 aaKnown RBP14.71□□□□□ -0.05
PTCH1-217ENST00000548420 SYT15Q9BQS2 421 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 TMEM8AQ9HCN3 771 aa14.71□□□□□ -0.05
PTCH1-217ENST00000548420 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-217ENST00000548420 A0A1W2PNU3 283 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-217ENST00000548420 TRIM49BA6NDI0 452 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 PSMA7O14818 248 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 HLA-DRAP01903 254 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 ITGB2P05107 769 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 TRIM49P0CI25 452 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 TRIM49CP0CI26 452 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 EPB41P11171 864 aaKnown RBP14.7□□□□□ -0.06
PTCH1-217ENST00000548420 MAGEA11P43364 429 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 LSSP48449 732 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 GCLMP48507 274 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 CDH8P55286 799 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 USP46P62068 366 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 ILKQ13418 452 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 STIM1Q13586 685 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 MAPRE1Q15691 268 aaKnown RBP14.7□□□□□ -0.06
PTCH1-217ENST00000548420 ZNF667Q5HYK9 610 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 CRYBG3Q68DQ2 2970 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 FAM124AQ86V42 546 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 MYCBPAPQ8TBZ2 947 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 TAS1R2Q8TE23 839 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 WBP2Q969T9 261 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 SEMA3CQ99985 751 aa14.7□□□□□ -0.06
PTCH1-217ENST00000548420 SDCBP2Q9H190 292 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms