RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 MLH1P40692 756 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 TMED10P49755 219 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 SCNN1BP51168 640 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 EIF3EP60228 445 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 PPIL2Q13356 520 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 TFDP1Q14186 410 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 DLGAP5Q15398 846 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 MIS18BP1Q6P0N0 1132 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 NLRC3Q7RTR2 1065 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 CBWD2Q8IUF1 395 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 C19orf47Q8N9M1 422 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 TRIM11Q96F44 468 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 RBM41Q96IZ5 413 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 AGAP3Q96P47 875 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 MCEEQ96PE7 176 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 SERPINI1Q99574 410 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 WDR11Q9BZH6 1224 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 PICK1Q9NRD5 415 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 TOPORSQ9NS56 1045 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 PIH1D1Q9NWS0 290 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 RNF186Q9NXI6 227 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 MTMR4Q9NYA4 1195 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 HSPBP1Q9NZL4 362 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 TLK1Q9UKI8 766 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 ZMYND8Q9ULU4 1186 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 SCAF8Q9UPN6 1271 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 MRPL11Q9Y3B7 192 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 K7ERI5 159 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 TP73O15350 636 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 PRPSAP2O60256 369 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 RBP3P10745 1247 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 MAOBP27338 520 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 SHMT1P34896 483 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 PCYT1AP49585 367 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 CDH6P55285 790 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 ZNF200P98182 395 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 OTUD4Q01804 1114 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 POU5F1BQ06416 359 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 MCL1Q07820 350 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 CBWD6Q4V339 395 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 CBWD3Q5JTY5 395 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 CBWD5Q5RIA9 395 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 RARS2Q5T160 578 aaKnown RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 RNF180Q86T96 592 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 ECHDC2Q86YB7 292 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 RIBC1Q8N443 379 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 CKAP2Q8WWK9 683 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 ZNF75CPQ92670 426 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 EZH1Q92800 747 aaPredicted RBP5.66□□□□□ -1.5
LIMA1-203ENST00000547825 SLC35C1Q96A29 364 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 E2F7Q96AV8 911 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 DNAJC19Q96DA6 116 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 CLPTM1LQ96KA5 538 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 WDR18Q9BV38 432 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 ADAM19Q9H013 955 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 AGPAT3Q9NRZ7 376 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 NMRK1Q9NWW6 199 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 FZD1Q9UP38 647 aa5.66□□□□□ -1.5
LIMA1-203ENST00000547825 REV3LO60673 3130 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 O00370 1275 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 EYA4O95677 639 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 GGPS1O95749 300 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 TP53P04637 393 aaPredicted RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 INHBEP58166 350 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 GIT2Q14161 759 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 C16orf72Q14CZ0 275 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 ATP13A4Q4VNC1 1196 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 CYP4A22Q5TCH4 519 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 EMC10Q5UCC4 262 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 PLA2G4FQ68DD2 849 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 KDELC2Q7Z4H8 507 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 PALB2Q86YC2 1186 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 MFN1Q8IWA4 741 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 FBXO36Q8NEA4 188 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 USP6NLQ92738 828 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 NINJ1Q92982 152 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 HEXIM2Q96MH2 286 aaKnown RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 MTMR9Q96QG7 549 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 NDNQ99608 321 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 PRPF18Q99633 342 aaKnown RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 TARS2Q9BW92 718 aaKnown RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 DENND2DQ9H6A0 471 aaPredicted RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 IL1RL2Q9HB29 575 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 A1CFQ9NQ94 594 aaKnown RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 ARHGEF4Q9NR80 690 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 C20orf96Q9NUD7 363 aaPredicted RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 GALNT8Q9NY28 637 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 GTSE1Q9NYZ3 720 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 SENP1Q9P0U3 644 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 ZC3H7BQ9UGR2 993 aaKnown RBP5.65□□□□□ -1.5
LIMA1-203ENST00000547825 KCNG1Q9UIX4 513 aa5.65□□□□□ -1.5
LIMA1-203ENST00000547825 FAM237BA0A1B0GVD1 139 aa5.65□□□□□ -1.51
LIMA1-203ENST00000547825 A0A1W2PPM1 405 aa5.65□□□□□ -1.51
LIMA1-203ENST00000547825 LINC01387J3KSC0 135 aa5.65□□□□□ -1.51
LIMA1-203ENST00000547825 KCNN4O15554 427 aa5.65□□□□□ -1.51
LIMA1-203ENST00000547825 MT-CO1P00395 513 aa5.65□□□□□ -1.51
LIMA1-203ENST00000547825 SLC4A1P02730 911 aa5.65□□□□□ -1.51
LIMA1-203ENST00000547825 ADH7P40394 386 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms