RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ABCB8Q9NUT2 735 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 KIAA1468Q9P260 1216 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 WASF3Q9UPY6 502 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 TPRP12270 2363 aaKnown RBP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 TNRC6BQ9UPQ9 1833 aaKnown RBP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 BECN2A8MW95 431 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 ACSL4O60488 711 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 TBL1XO60907 577 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 KRT37O76014 449 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 FBXO21O94952 628 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 TOP3BO95985 862 aaKnown RBP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 SLC9A1P19634 815 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 CD70P32970 193 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 SLC11A2P49281 568 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 ZNF445P59923 1031 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 GFPT1Q06210 699 aaPredicted RBP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 RING1Q06587 406 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 SEMA3BQ13214 749 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 MPP7Q5T2T1 576 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 NUGGCQ68CJ6 796 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 CHST9Q7L1S5 443 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 CACUL1Q86Y37 369 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 IRF2BP1Q8IU81 584 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 CREBRFQ8IUR6 639 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 UNC45BQ8IWX7 931 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 RGL4Q8IZJ4 473 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 ADAM32Q8TC27 787 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 DQX1Q8TE96 717 aaKnown RBP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 ZNF606Q8WXB4 792 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 PRCCQ92733 491 aaPredicted RBP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 AZIN2Q96A70 460 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 SLC39A13Q96H72 371 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 GPR174Q9BXC1 333 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 SLC4A5Q9BY07 1137 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 ST7Q9NRC1 585 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 XPO7Q9UIA9 1087 aaKnown RBP13.88□□□□□ -0.19
CPSF6-204ENST00000547486 RWDD2AQ9UIY3 292 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 GGA2Q9UJY4 613 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 PLXND1Q9Y4D7 1925 aa13.88□□□□□ -0.19
CPSF6-204ENST00000547486 ARHGAP33O14559 1287 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 PAPSS1O43252 624 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-204ENST00000547486 LETM1O95202 739 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-204ENST00000547486 IGLV3-19P01714 112 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 PABPC1P11940 636 aaKnown RBP13.87□□□□□ -0.19
CPSF6-204ENST00000547486 UBE2HP62256 183 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 ARID5AQ03989 594 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 ZNF252P-AS1Q0IIN9 211 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-204ENST00000547486 PLEKHG6Q3KR16 790 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 FNDC3BQ53EP0 1204 aaKnown RBP13.87□□□□□ -0.19
CPSF6-204ENST00000547486 MBLAC2Q68D91 279 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 TRIM65Q6PJ69 517 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 PIP4P1Q86T03 277 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 TMEM110Q86TL2 294 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 WDTC1Q8N5D0 677 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 STK32AQ8WU08 396 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 DNASE2BQ8WZ79 361 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 GOLGA1Q92805 767 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 PRICKLE1Q96MT3 831 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-204ENST00000547486 MTG2Q9H4K7 406 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 STIM2Q9P246 746 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 TJP2Q9UDY2 1190 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 PLA2G4CQ9UP65 541 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 ACACBO00763 2458 aa13.87□□□□□ -0.19
CPSF6-204ENST00000547486 METTL12A8MUP2 240 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 FGFR1OPO95684 399 aaKnown RBP13.86□□□□□ -0.19
CPSF6-204ENST00000547486 C7P10643 843 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 SPINK2P20155 84 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 OXTRP30559 389 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 ATXN3P54252 364 aaPredicted RBP13.86□□□□□ -0.19
CPSF6-204ENST00000547486 RPS24P62847 133 aaKnown RBP13.86□□□□□ -0.19
CPSF6-204ENST00000547486 PITX1P78337 314 aaPredicted RBP13.86□□□□□ -0.19
CPSF6-204ENST00000547486 FOXC1Q12948 553 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 TAF5Q15542 800 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 FSCBQ5H9T9 825 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 SYCP2LQ5T4T6 812 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 RABEPKQ7Z6M1 372 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 TAC4Q86UU9 113 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 FAM124AQ86V42 546 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 AHI1Q8N157 1196 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 CFAP52Q8N1V2 620 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 MINDY1Q8N5J2 469 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 CADM4Q8NFZ8 388 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 OR2T3Q8NH03 318 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 FIBINQ8TAL6 211 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 FOXJ1Q92949 421 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 FAM149B1Q96BN6 582 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 NUP58Q9BVL2 599 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 NUCKS1Q9H1E3 243 aaKnown RBP13.86□□□□□ -0.19
CPSF6-204ENST00000547486 PRSS16Q9NQE7 514 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 AJAP1Q9UKB5 411 aaPredicted RBP13.86□□□□□ -0.19
CPSF6-204ENST00000547486 INTS6Q9UL03 887 aaKnown RBP13.86□□□□□ -0.19
CPSF6-204ENST00000547486 TLR6Q9Y2C9 796 aa13.86□□□□□ -0.19
CPSF6-204ENST00000547486 SPAARA0A1B0GVQ0 90 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 UPK3BL1B0FP48 263 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 UPK3BL2E5RIL1 263 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 E5RJQ4 531 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 IRAK2O43187 625 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms