RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZFRQ96KR1 1074 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 SIK2Q9H0K1 926 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 PCDH18Q9HCL0 1135 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 GKN1Q9NS71 199 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 SMPD4Q9NXE4 827 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 DONSONQ9NYP3 566 aa16.39■□□□□ 0.21
TRAFD1-203ENST00000547063 E2F8A0AVK6 867 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 C3orf70A6NLC5 250 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 PI4K2BG5E9Z4 385 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 EEF2KO00418 725 aaKnown RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 DAPK3O43293 454 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 ACSL4O60488 711 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 TJP3O95049 919 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 IRF1P10914 325 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 ZFXP17010 805 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 CDKN2BP42772 138 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 TPI1P60174 286 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 DLX2Q07687 328 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 SEMA3BQ13214 749 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 ZNF211Q13398 564 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 DPYSL3Q14195 570 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 TAZQ16635 292 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 MFSD7Q6UXD7 560 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 HTR3DQ70Z44 454 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 NPAS3Q8IXF0 933 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 CELF5Q8N6W0 485 aaKnown RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 SMRP1Q8NCR6 262 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 COG1Q8WTW3 980 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 E2F7Q96AV8 911 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 KCTD15Q96SI1 283 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 OSBPL8Q9BZF1 889 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 RETREG1Q9H6L5 497 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 KLHL11Q9NVR0 708 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 MTMR10Q9NXD2 777 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 CDH7Q9ULB5 785 aa16.38■□□□□ 0.21
TRAFD1-203ENST00000547063 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 hCG_1818297A0A087WSY0 165 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 LEFTY2O00292 366 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 FGF10O15520 208 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 CREB3O43889 395 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 SRGAP2O75044 1071 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 CA9Q16790 459 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 MS4A13Q5J8X5 152 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 ADGRF1Q5T601 910 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 Q7L0L9 218 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 GET4Q7L5D6 327 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 CREG2Q8IUH2 290 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 DENND1CQ8IV53 801 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 ARID3BQ8IVW6 561 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 MNS1Q8NEH6 495 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 ZSCAN18Q8TBC5 510 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 SH3RF2Q8TEC5 729 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 TSC1Q92574 1164 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 FGF13Q92913 245 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 USP13Q92995 863 aaPredicted RBP16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 FAF2Q96CS3 445 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 TBC1D31Q96DN5 1066 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 RNF157Q96PX1 679 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 ANLNQ9NQW6 1124 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 OBP2AQ9NY56 170 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 CFAP97Q9P2B7 532 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 TBC1D14Q9P2M4 693 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 STOML2Q9UJZ1 356 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 MRFAP1Q9Y605 127 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 HS3ST4Q9Y661 456 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 LAMA3Q16787 3333 aa16.37■□□□□ 0.21
TRAFD1-203ENST00000547063 GOLGA6L10A0A0M3HER8 536 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 F5H5T6 163 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 I6L893 689 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 SLC9A3R1O14745 358 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 FGGP02679 453 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 CHKAP35790 457 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 CBX2Q14781 532 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 SKIV2LQ15477 1246 aaKnown RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 LONRF2Q1L5Z9 754 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 ANKRD20A8PQ5CZ79 823 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 RABGAP1LQ5R372 815 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 PIK3R6Q5UE93 754 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 Q6ZNB5 142 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 RFX8Q6ZV50 586 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 CHSY1Q86X52 802 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 SLC13A5Q86YT5 568 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 RFX6Q8HWS3 928 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 PYROXD2Q8N2H3 581 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 TTC13Q8NBP0 860 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 SMARCD2Q92925 531 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 OTUB2Q96DC9 234 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 CAPZA3Q96KX2 299 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 CSPG4P5Q96PW8 444 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 CATSPERBQ9H7T0 1116 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 UBE2ZQ9H832 354 aaPredicted RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 TRPV4Q9HBA0 871 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 TMPRSS4Q9NRS4 437 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 HOMER3Q9NSC5 361 aa16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 CWC15Q9P013 229 aaKnown RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 PPARGC1AQ9UBK2 798 aaKnown RBP16.36■□□□□ 0.21
TRAFD1-203ENST00000547063 AGO1Q9UL18 857 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms