RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 BEND5Q7L4P6 421 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 OVCA2Q8WZ82 227 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 MSI2Q96DH6 328 aaKnown RBP4.81□□□□□ -1.64
CCDC38-204ENST00000546816 ZNF845Q96IR2 970 aaPredicted RBP4.81□□□□□ -1.64
CCDC38-204ENST00000546816 SNX27Q96L92 541 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 MEIS3Q99687 375 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 SENP7Q9BQF6 1050 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 COLEC11Q9BWP8 271 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 PCDHAC1Q9H158 963 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 DECR2Q9NUI1 292 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 MSRB1Q9NZV6 116 aa4.81□□□□□ -1.64
CCDC38-204ENST00000546816 SPATA31A5Q5VU36 1347 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 SPATA31A7Q8IWB4 1347 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 A0A0G2JK05 382 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 TMEM272A0A1B0GTI8 110 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 A0A1W2PPC1 479 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 TTC34A8MYJ7 566 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 SPTLC2O15270 562 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 DHHO43323 396 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 NDST3O95803 873 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 SYF2O95926 243 aaKnown RBP4.8□□□□□ -1.64
CCDC38-204ENST00000546816 PECAM1P16284 738 aaPredicted RBP4.8□□□□□ -1.64
CCDC38-204ENST00000546816 MMP8P22894 467 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 STAT6P42226 847 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 STT3AP46977 705 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 AGTR2P50052 363 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 SLC5A9Q2M3M2 681 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 CCDC144NLQ6NUI1 221 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 B4GALNT4Q76KP1 1039 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 UEVLDQ8IX04 471 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 CCDC33Q8N5R6 958 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 OR52L2PQ8NGH6 319 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 COG5Q9UP83 839 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 FAM50BQ9Y247 325 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 MAN2B2Q9Y2E5 1009 aa4.8□□□□□ -1.64
CCDC38-204ENST00000546816 APOL1O14791 398 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 USP12O75317 370 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 ENO1P06733 434 aaKnown RBP4.79□□□□□ -1.64
CCDC38-204ENST00000546816 EGR1P18146 543 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 TFEBP19484 476 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 DMWDQ09019 674 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 ODF3L2Q3SX64 289 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 ARHGAP15Q53QZ3 475 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 ZNF324BQ6AW86 544 aaPredicted RBP4.79□□□□□ -1.64
CCDC38-204ENST00000546816 LAS2Q8IYD9 372 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 ARL14EPQ8N8R7 260 aaPredicted RBP4.79□□□□□ -1.64
CCDC38-204ENST00000546816 GLIS1Q8NBF1 620 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 SLC44A5Q8NCS7 719 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 CCDC150Q8NCX0 1101 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 GLMPQ8WWB7 406 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 TBCBQ99426 244 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 TUBB6Q9BUF5 446 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 ELOVL1Q9BW60 279 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 NAA15Q9BXJ9 866 aaKnown RBP4.79□□□□□ -1.64
CCDC38-204ENST00000546816 ARHGAP39Q9C0H5 1083 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 CDCP1Q9H5V8 836 aa4.79□□□□□ -1.64
CCDC38-204ENST00000546816 PAPOLBQ9NRJ5 636 aaKnown RBP4.79□□□□□ -1.64
CCDC38-204ENST00000546816 F8W810 466 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 UGDHO60701 494 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 ATG13O75143 517 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 TBXAS1P24557 533 aaPredicted RBP4.78□□□□□ -1.64
CCDC38-204ENST00000546816 CDC25AP30304 524 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 POLD2P49005 469 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 P2RX3P56373 397 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 COBLL1Q53SF7 1204 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 HIBCHQ6NVY1 386 aaPredicted RBP4.78□□□□□ -1.64
CCDC38-204ENST00000546816 C16orf89Q6UX73 402 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 RHPN2Q8IUC4 686 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 ADGRF4Q8IZF3 695 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 ASB12Q8WXK4 309 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 NUDT22Q9BRQ3 303 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 PIMREGQ9BSJ6 248 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 SARGQ9BW04 601 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 TTLL2Q9BWV7 592 aa4.78□□□□□ -1.64
CCDC38-204ENST00000546816 AGO2Q9UKV8 859 aaKnown RBP4.78□□□□□ -1.64
CCDC38-204ENST00000546816 IFITM10A6NMD0 228 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
CCDC38-204ENST00000546816 KRT10P13645 584 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 GSTM5P46439 218 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 PGM5Q15124 567 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 ARL13BQ3SXY8 428 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 DGKKQ5KSL6 1271 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 TTLL5Q6EMB2 1281 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 CAPRIN2Q6IMN6 1127 aaKnown RBP4.77□□□□□ -1.65
CCDC38-204ENST00000546816 ZNF474Q6S9Z5 364 aaPredicted RBP4.77□□□□□ -1.65
CCDC38-204ENST00000546816 MIB2Q96AX9 1013 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 GRAMD1AQ96CP6 724 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 MYLK2Q9H1R3 596 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 METTL14Q9HCE5 456 aaKnown RBP4.77□□□□□ -1.65
CCDC38-204ENST00000546816 RGL1Q9NZL6 768 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 B3GNT3Q9Y2A9 372 aa4.77□□□□□ -1.65
CCDC38-204ENST00000546816 TRIP12Q14669 1992 aaPredicted RBP4.76□□□□□ -1.65
CCDC38-204ENST00000546816 APAF1O14727 1248 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 VIPP01282 170 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 RFPL3SP0C7P2 107 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 HARSP12081 509 aaKnown RBP4.76□□□□□ -1.65
CCDC38-204ENST00000546816 PPATQ06203 517 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 SAFBQ15424 915 aaKnown RBP eCLIP4.76□□□□□ -1.65
CCDC38-204ENST00000546816 MAPKAPK3Q16644 382 aa4.76□□□□□ -1.65
CCDC38-204ENST00000546816 MSANTD2Q6P1R3 559 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms