RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNHG1-224ENST00000545688 DECR2Q9NUI1 292 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 RGL1Q9NZL6 768 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 AGO2Q9UKV8 859 aaKnown RBP5.42□□□□□ -1.54
SNHG1-224ENST00000545688 LRP12Q9Y561 859 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 EMSYQ7Z589 1322 aa5.42□□□□□ -1.54
SNHG1-224ENST00000545688 TMEM272A0A1B0GTI8 110 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 FAM234BA2RU67 622 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 APAF1O14727 1248 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 PMM2O15305 246 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 DHHO43323 396 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 SYF2O95926 243 aaKnown RBP5.41□□□□□ -1.54
SNHG1-224ENST00000545688 ENO1P06733 434 aaKnown RBP5.41□□□□□ -1.54
SNHG1-224ENST00000545688 ALDH7A1P49419 539 aaKnown RBP5.41□□□□□ -1.54
SNHG1-224ENST00000545688 NSUN2Q08J23 767 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNHG1-224ENST00000545688 PGM5Q15124 567 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 SAFBQ15424 915 aaKnown RBP eCLIP5.41□□□□□ -1.54
SNHG1-224ENST00000545688 INPP5JQ15735 1006 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-224ENST00000545688 ARL13BQ3SXY8 428 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 ANXA2RQ3ZCQ2 193 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 KIAA1161Q6NSJ0 714 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 HIBCHQ6NVY1 386 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-224ENST00000545688 ACRBPQ8NEB7 543 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 MLXIPQ9HAP2 919 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 STARD7Q9NQZ5 370 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 THSD1Q9NS62 852 aa5.41□□□□□ -1.54
SNHG1-224ENST00000545688 UNC13AQ9UPW8 1703 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 SMAD6O43541 496 aaKnown RBP5.4□□□□□ -1.54
SNHG1-224ENST00000545688 NCK2O43639 380 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 SRGAP2BP0DMP2 458 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 SEMA3AQ14563 771 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 MAPKAPK3Q16644 382 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 SLC35G1Q2M3R5 365 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 ODF3L2Q3SX64 289 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 GLE1Q53GS7 698 aaKnown RBP5.4□□□□□ -1.54
SNHG1-224ENST00000545688 LIPMQ5VYY2 423 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 LVRNQ6Q4G3 990 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 ZNF474Q6S9Z5 364 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-224ENST00000545688 ZFPM2Q8WW38 1151 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 GPR78Q96P69 363 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 NUDT22Q9BRQ3 303 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 NAA15Q9BXJ9 866 aaKnown RBP5.4□□□□□ -1.54
SNHG1-224ENST00000545688 EIF2AQ9BY44 585 aaKnown RBP5.4□□□□□ -1.54
SNHG1-224ENST00000545688 FSCN3Q9NQT6 498 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 IPO11Q9UI26 975 aaKnown RBP5.4□□□□□ -1.54
SNHG1-224ENST00000545688 B3GNT3Q9Y2A9 372 aa5.4□□□□□ -1.54
SNHG1-224ENST00000545688 CC2D2AQ9P2K1 1620 aa5.4□□□□□ -1.55
SNHG1-224ENST00000545688 KIR2DS5A0A0G2JLQ3 304 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 KIR2DS3K7RE56 304 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 ATG13O75143 517 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 MYL3P08590 195 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 RFPL3SP0C7P2 107 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 CBSLP0DN79 551 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 CBSP35520 551 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 ERV3-1Q14264 604 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 SMTNL2Q2TAL5 461 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 NUGGCQ68CJ6 796 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 MSANTD2Q6P1R3 559 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 B4GALNT4Q76KP1 1039 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 KRT27Q7Z3Y8 459 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 SKAP1Q86WV1 359 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 TMEM199Q8N511 208 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 NPIPB3Q92617 1050 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 PMM1Q92871 262 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 EME1Q96AY2 570 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 HIPK2Q9H2X6 1198 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 AAMDCQ9H7C9 122 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 CKAP5Q14008 2032 aa5.39□□□□□ -1.55
SNHG1-224ENST00000545688 J3KTA2 159 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 NPC1O15118 1278 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 PRPF4O43172 522 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNHG1-224ENST00000545688 ZC3H11AO75152 810 aaKnown RBP eCLIP5.38□□□□□ -1.55
SNHG1-224ENST00000545688 PARNO95453 639 aaKnown RBP5.38□□□□□ -1.55
SNHG1-224ENST00000545688 SGPL1O95470 568 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 TNFSF4P23510 183 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 CDKN2AP42771 156 aaKnown RBP5.38□□□□□ -1.55
SNHG1-224ENST00000545688 PPATQ06203 517 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 DLGAP5Q15398 846 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 FAM209BQ5JX69 171 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 TTLL5Q6EMB2 1281 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 RASGRP3Q8IV61 690 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 CCAR1Q8IX12 1150 aaKnown RBP5.38□□□□□ -1.55
SNHG1-224ENST00000545688 ASB5Q8WWX0 329 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 MRPL44Q9H9J2 332 aaKnown RBP5.38□□□□□ -1.55
SNHG1-224ENST00000545688 ERVK-5Q9HDB9 667 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 FBXO28Q9NVF7 368 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 UTS2RQ9UKP6 389 aa5.38□□□□□ -1.55
SNHG1-224ENST00000545688 ZNF335Q9H4Z2 1342 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-224ENST00000545688 NOTCH4Q99466 2003 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 GXYLT2A0PJZ3 443 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 A6NNC1 897 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 TAF5LO75529 589 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 KAT7O95251 611 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 WNT1P04628 370 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 ITGA5P08648 1049 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 TRIM27P14373 513 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 CBFBQ13951 182 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 PTGR1Q14914 329 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 PIK3CD-AS1Q5SR53 167 aa5.37□□□□□ -1.55
SNHG1-224ENST00000545688 FBXO38Q6PIJ6 1188 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms