RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	LRRC71	Q8N4P6	559 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	ZCCHC9	Q8N567	271 aa	Known RBP	7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	IL17RC	Q8NAC3	791 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	TXNDC5	Q8NBS9	432 aa	Known RBP	7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	DNAJB8	Q8NHS0	232 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	PGBD1	Q96JS3	809 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	CNDP2	Q96KP4	475 aa	Known RBP	7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	MRGPRX3	Q96LB0	322 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	NAP1L5	Q96NT1	182 aa	Predicted RBP	7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	IPO9	Q96P70	1041 aa	Known RBP	7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	NAP1L4	Q99733	375 aa	Known RBP	7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	MXRA8	Q9BRK3	442 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	CYP4F11	Q9HBI6	524 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	KCNH7	Q9NS40	1196 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	WHRN	Q9P202	907 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	ACTL7B	Q9Y614	415 aa		7.24	□□□□□ -1.25
LDHA-223	ENST00000545215	NFASC	O94856	1347 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215		A0A1B0GVT2	93 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	TCRBV21S2A2	A0A5A6	115 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	E2F8	A0AVK6	867 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	BCAT2	O15382	392 aa	Predicted RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	PRODH	O43272	600 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	TBX1	O43435	398 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	RRP9	O43818	475 aa	Known RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	NDUFS2	O75306	463 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	VPS4B	O75351	444 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ZNF217	O75362	1048 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	PPM1B	O75688	479 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	LRIG2	O94898	1065 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	MT-CO3	P00414	261 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	KRT7	P08729	469 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ITGA4	P13612	1032 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	CD247	P20963	164 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	KRT2	P35908	639 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ASPA	P45381	313 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	CCT8	P50990	548 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	NUCB2	P80303	420 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	CDC42EP1	Q00587	391 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ELAVL2	Q12926	359 aa	Known RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	HSF5	Q4G112	596 aa	Predicted RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	CEP55	Q53EZ4	464 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	FAM160B1	Q5W0V3	765 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	LYPD4	Q6UWN0	246 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	BRAP	Q7Z569	592 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	MCEMP1	Q8IX19	187 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	BLID	Q8IZY5	108 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	AFAP1L2	Q8N4X5	818 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ALLC	Q8N6M5	410 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	MFSD2A	Q8NA29	543 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	CNNM3	Q8NE01	707 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	BVES	Q8NE79	360 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	GSTCD	Q8NEC7	633 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	PPP1R14A	Q96A00	147 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	RCC1L	Q96I51	464 aa	Known RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	LURAP1	Q96LR2	239 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	PAAF1	Q9BRP4	392 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	TARS2	Q9BW92	718 aa	Known RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ANO3	Q9BYT9	981 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	INO80B	Q9C086	356 aa	Predicted RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	FOXP1	Q9H334	677 aa	Predicted RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	VPS54	Q9P1Q0	977 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	PHTF1	Q9UMS5	762 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	VPS4A	Q9UN37	437 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	G3BP2	Q9UN86	482 aa	Known RBP	7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	CEP131	Q9UPN4	1083 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	EMC9	Q9Y3B6	208 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	ATP6V1D	Q9Y5K8	247 aa		7.23	□□□□□ -1.25
LDHA-223	ENST00000545215	TDRD15	B5MCY1	1934 aa	Known RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	SDK2	Q58EX2	2172 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	WDR64	B1ANS9	1081 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	DDX39A	O00148	427 aa	Known RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	IPO5	O00410	1097 aa	Known RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	STX6	O43752	255 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	RNGTT	O60942	597 aa	Known RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	USP12	O75317	370 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	NADK	O95544	446 aa	Predicted RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	KLF8	O95600	359 aa	Predicted RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	GABRG2	P18507	467 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	SYT1	P21579	422 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	TRAPPC10	P48553	1259 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	ROR1	Q01973	937 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	TWF1	Q12792	350 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	ITGB3BP	Q13352	177 aa	Predicted RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	ORC2	Q13416	577 aa	Predicted RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	AUH	Q13825	339 aa	Known RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	KIF19	Q2TAC6	998 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	EOGT	Q5NDL2	527 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	JAKMIP3	Q5VZ66	844 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	SLC8B1	Q6J4K2	584 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	ABHD15	Q6UXT9	468 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	CATSPER4	Q7RTX7	472 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	ADAT2	Q7Z6V5	191 aa	Known RBP	7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	LRRTM3	Q86VH5	581 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	PLA2G4D	Q86XP0	818 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	FAM114A1	Q8IWE2	563 aa		7.22	□□□□□ -1.25
LDHA-223	ENST00000545215	DIS3L2	Q8IYB7	885 aa	Known RBP	7.22	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms