RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CABLES1Q8TDN4 633 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 FOPNLQ96NB1 174 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 TMEM168Q9H0V1 697 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 GPAMQ9HCL2 828 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 ETNK2Q9NVF9 386 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 EXD2Q9NVH0 621 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 FLT1P17948 1338 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PRAMEF33A0A0G2JMD5 474 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PDLIM1O00151 329 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CHP2O43745 196 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PRAMEF10O60809 474 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CHRM3P20309 590 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PTGER2P43116 358 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 OR2B6P58173 313 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 QPCTQ16769 361 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 FGD3Q5JSP0 725 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 HPS6Q86YV9 775 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 MYO1HQ8N1T3 1032 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 TFB1MQ8WVM0 346 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 AKAP1Q92667 903 aaKnown RBP eCLIP8.82□□□□□ -1
ATXN3-216ENST00000545170 MARK4Q96L34 752 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 FRMD8Q9BZ67 464 aaPredicted RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 CHST12Q9NRB3 414 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PACSIN3Q9UKS6 424 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PCDHA6Q9UN73 950 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 PCDHA8Q9Y5H6 950 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 ARHGEF12Q9NZN5 1544 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 SRRM3A6NNA2 597 aaPredicted RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 C9IYK1 514 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CIAO1O76071 339 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 MPOP05164 745 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 GJA9P57773 515 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 YWHAZP63104 245 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 PHKG1Q16816 387 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CIR1Q86X95 450 aaPredicted RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 THEM5Q8N1Q8 247 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 ZNF614Q8N883 585 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CAB39LQ9H9S4 337 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 ANXA6P08133 673 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 THEGLP0DJG4 465 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 DSG3P32926 999 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 SCNN1DP51172 638 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 LCN1P1Q5VSP4 162 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.82□□□□□ -1
ATXN3-216ENST00000545170 SPON2Q9BUD6 331 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CDH19Q9H159 772 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 LY9Q9HBG7 655 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 CAPN10Q9HC96 672 aa8.82□□□□□ -1
ATXN3-216ENST00000545170 REXO2Q9Y3B8 237 aaKnown RBP8.82□□□□□ -1
ATXN3-216ENST00000545170 TCP10L2B9ZVM9 353 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 MDM4O15151 490 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 RBP3P10745 1247 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 THRBP10828 461 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 PDGFRAP16234 1089 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 FDFT1P37268 417 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 RAP1GAPP47736 663 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 ZNF267Q14586 743 aaPredicted RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 TTC23Q5W5X9 447 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 AAGABQ6PD74 315 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 TBC1D10CQ8IV04 446 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 SEPT12Q8IYM1 358 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 FBXO30Q8TB52 745 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 HAVCR1Q96D42 359 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 KATNAL1Q9BW62 490 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 BHLHE41Q9C0J9 482 aaPredicted RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 EPB41L4BQ9H329 900 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 HPF1Q9NWY4 346 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 RBAKQ9NYW8 714 aaPredicted RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 SIK3Q9Y2K2 1263 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 FAM237BA0A1B0GVD1 139 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 RGSL1A5PLK6 1076 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 TRIM64A6NGJ6 449 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 TRIM64BA6NI03 449 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 PLOD2O00469 737 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 PDXKO00764 312 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 APOC1P02654 83 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 CHRNGP07510 517 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 IQCF2Q8IXL9 164 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 ABI1Q8IZP0 508 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 ZNF655Q8N720 491 aaPredicted RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 ACTRT2Q8TDY3 377 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 DYNLL2Q96FJ2 89 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 RPS6KL1Q9Y6S9 549 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 PRKAR2AP13861 404 aaKnown RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 TKTP29401 623 aaKnown RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 MCCD1P59942 119 aaPredicted RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 PSMD5Q16401 504 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 TMEM53Q6P2H8 277 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 SCN4BQ8IWT1 228 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 GAL3ST3Q96A11 431 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 ABCB9Q9NP78 766 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 GPR108Q9NPR9 543 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 NCKIPSDQ9NZQ3 722 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 URB2Q14146 1524 aaKnown RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 MAGI1Q96QZ7 1491 aaPredicted RBP8.81□□□□□ -1
ATXN3-216ENST00000545170 IFT140Q96RY7 1462 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 PPP1R3GB7ZBB8 358 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 H0Y858 1186 aa8.81□□□□□ -1
ATXN3-216ENST00000545170 SNAP23O00161 211 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms