RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ARID5AQ03989 594 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 ZBTB16Q05516 673 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 BIRC3Q13489 604 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 NCOA4Q13772 614 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 E2F5Q15329 346 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 BMT2Q1RMZ1 405 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 NCEH1Q6PIU2 408 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 KDM7AQ6ZMT4 941 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 CHST9Q7L1S5 443 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 EPM2AIP1Q7L775 607 aaPredicted RBP9.83□□□□□ -0.84
CHD4-212ENST00000545083 CCDC186Q7Z3E2 898 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 ADIPOR2Q86V24 386 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 FAM217AQ8IXS0 508 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 CACTIN-AS1Q8N1I8 211 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 CPXM2Q8N436 756 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 ZNF276Q8N554 614 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 XXYLT1Q8NBI6 393 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 ZNF248Q8NDW4 579 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 DDI1Q8WTU0 396 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 SLC2A11Q9BYW1 496 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 DCLK3Q9C098 648 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 GDF3Q9NR23 364 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 CLIC5Q9NZA1 410 aa9.83□□□□□ -0.84
CHD4-212ENST00000545083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 LRRIQ3A6PVS8 624 aaPredicted RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 MT-CO3P00414 261 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 C4BPAP04003 597 aaKnown RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 MPOP05164 745 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 RALAP11233 206 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 CKMT2P17540 419 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 CD38P28907 300 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 STAT6P42226 847 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 PCBP4P57723 403 aaKnown RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 NXPH1P58417 271 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 COG7P83436 770 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 ILKQ13418 452 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 PROX2Q3B8N5 592 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 TTC31Q49AM3 519 aaPredicted RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 ZNF776Q68DI1 518 aaPredicted RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 SPOPLQ6IQ16 392 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 BRAPQ7Z569 592 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 KIAA0907Q7Z7F0 614 aaPredicted RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 SPATS2Q86XZ4 545 aaKnown RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 NELFCDQ8IXH7 590 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 CCDC65Q8IXS2 484 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 ZNF507Q8TCN5 953 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 WFDC5Q8TCV5 224 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD4-212ENST00000545083 RSPH9Q9H1X1 276 aaPredicted RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 PABPC3Q9H361 631 aaKnown RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 FBRSQ9HAH7 460 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 AASDHPPTQ9NRN7 309 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 ABCB8Q9NUT2 735 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 FBXL12Q9NXK8 326 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 ADAMTS1Q9UHI8 967 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 PLA2G4CQ9UP65 541 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 SRPRBQ9Y5M8 271 aaKnown RBP9.82□□□□□ -0.84
CHD4-212ENST00000545083 USP3Q9Y6I4 520 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 BSNQ9UPA5 3926 aa9.82□□□□□ -0.84
CHD4-212ENST00000545083 TEX15Q9BXT5 2789 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 FLNCQ14315 2725 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 NBPF19A0A087WUL8 3843 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 A0A1W2PP55 124 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 SLC12A8A0AV02 714 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 TRIM38O00635 465 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 MID1O15344 667 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 EIF3DO15371 548 aaKnown RBP eCLIP9.81□□□□□ -0.848e-8■□□□□ 9.1
CHD4-212ENST00000545083 YKT6O15498 198 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 DLDP09622 509 aaKnown RBP9.81□□□□□ -0.84
CHD4-212ENST00000545083 PABPC1P11940 636 aaKnown RBP9.81□□□□□ -0.84
CHD4-212ENST00000545083 ACP1P24666 158 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 ASPAP45381 313 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 RXRGP48443 463 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 PSEN1P49768 467 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 SGSHP51688 502 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 EHHADHQ08426 723 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 MPPE1Q53F39 396 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 MBLAC2Q68D91 279 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 CCDC73Q6ZRK6 1079 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 STXBP4Q6ZWJ1 553 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 USP30Q70CQ3 517 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 TADA2BQ86TJ2 420 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 UNC93AQ86WB7 457 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 DHX40Q8IX18 779 aaKnown RBP9.81□□□□□ -0.84
CHD4-212ENST00000545083 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.81□□□□□ -0.84
CHD4-212ENST00000545083 GANCQ8TET4 914 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 WFIKKN2Q8TEU8 576 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 SNRNP27Q8WVK2 155 aaKnown RBP9.81□□□□□ -0.84
CHD4-212ENST00000545083 CYFIP2Q96F07 1278 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 MYO19Q96H55 970 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 TMX3Q96JJ7 454 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 ZNF578Q96N58 590 aaPredicted RBP9.81□□□□□ -0.84
CHD4-212ENST00000545083 TRIM4Q9C037 500 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 NEUROG2Q9H2A3 272 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 PNPLA8Q9NP80 782 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 MARCH2Q9P0N8 246 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 GGA2Q9UJY4 613 aa9.81□□□□□ -0.84
CHD4-212ENST00000545083 TLN1Q9Y490 2541 aaKnown RBP9.81□□□□□ -0.84
CHD4-212ENST00000545083 DOPEY2Q9Y3R5 2298 aa9.8□□□□□ -0.84
CHD4-212ENST00000545083 BOD1L1Q8NFC6 3051 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms