RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 RLN3Q8WXF3 142 aa17.58■□□□□ 0.4
HOXD8-204ENST00000544999 SLC2A13Q96QE2 648 aa17.58■□□□□ 0.4
HOXD8-204ENST00000544999 GANQ9H2C0 597 aa17.58■□□□□ 0.4
HOXD8-204ENST00000544999 DAAM1Q9Y4D1 1078 aa17.58■□□□□ 0.4
HOXD8-204ENST00000544999 RAD54BQ9Y620 910 aa17.58■□□□□ 0.4
HOXD8-204ENST00000544999 SDK1Q7Z5N4 2213 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 TYW5A2RUC4 315 aaKnown RBP17.57■□□□□ 0.4
HOXD8-204ENST00000544999 WASH3PC4AMC7 463 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 F8VZ95 297 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 TBL1XO60907 577 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 ERBB2P04626 1255 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 NDUFV2P19404 249 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 IL12RB1P42701 662 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 CDK17Q00537 523 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 EIF4EBP2Q13542 120 aaPredicted RBP17.57■□□□□ 0.4
HOXD8-204ENST00000544999 ZNF234Q14588 700 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 STARD3Q14849 445 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 DCAF6Q58WW2 860 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 TMEM215Q68D42 235 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 OLFML1Q6UWY5 402 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 ERMP1Q7Z2K6 904 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 KIAA0907Q7Z7F0 614 aaPredicted RBP17.57■□□□□ 0.4
HOXD8-204ENST00000544999 ZDHHC17Q8IUH5 632 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 DEFB106AQ8N104 65 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 HJURPQ8NCD3 748 aaPredicted RBP17.57■□□□□ 0.4
HOXD8-204ENST00000544999 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 ZNF397Q8NF99 534 aaPredicted RBP17.57■□□□□ 0.4
HOXD8-204ENST00000544999 NETO1Q8TDF5 533 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 CIPCQ9C0C6 399 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 PDCL3Q9H2J4 239 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 VPS45Q9NRW7 570 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 CALCOCO1Q9P1Z2 691 aa17.57■□□□□ 0.4
HOXD8-204ENST00000544999 LIMA1Q9UHB6 759 aaKnown RBP17.57■□□□□ 0.4
HOXD8-204ENST00000544999 CDV3Q9UKY7 258 aaKnown RBP17.57■□□□□ 0.4
HOXD8-204ENST00000544999 NUP205Q92621 2012 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 BCLAF3A2AJT9 711 aaKnown RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 ZNF217O75362 1048 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 MOCS2O96007 188 aaPredicted RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 PABPC1P11940 636 aaKnown RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 COPB1P53618 953 aaKnown RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 PITX1P78337 314 aaPredicted RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 SLC6A3Q01959 620 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 CREB5Q02930 508 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 ARID5AQ03989 594 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 CCDC6Q16204 474 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 ZC3H12AQ5D1E8 599 aaKnown RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 MS4A13Q5J8X5 152 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 SPDYCQ5MJ68 293 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 CHST9Q7L1S5 443 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 LPCAT2Q7L5N7 544 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 SLC26A9Q7LBE3 791 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 AHI1Q8N157 1196 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 ATP6V0D2Q8N8Y2 350 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 C12orf50Q8NA57 414 aaPredicted RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 DDX1Q92499 740 aaKnown RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 BTN2A3PQ96KV6 586 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 PRICKLE1Q96MT3 831 aaPredicted RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 NUCKS1Q9H1E3 243 aaKnown RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 SYNCQ9H7C4 482 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 ABCB8Q9NUT2 735 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 TMEM63CQ9P1W3 806 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 MBD1Q9UIS9 605 aaPredicted RBP17.56■□□□□ 0.4
HOXD8-204ENST00000544999 GGA2Q9UJY4 613 aa17.56■□□□□ 0.4
HOXD8-204ENST00000544999 CKAP5Q14008 2032 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 MAP3K13O43283 966 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 DAB1O75553 588 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 GRAP2O75791 330 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 CAVIN2O95810 425 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 SLC2A3P11169 496 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 KLK7P49862 253 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 TYRO3Q06418 890 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 NCAPHQ15003 741 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 SF3A2Q15428 464 aaKnown RBP17.55■□□□□ 0.4
HOXD8-204ENST00000544999 AASDHQ4L235 1098 aaPredicted RBP17.55■□□□□ 0.4
HOXD8-204ENST00000544999 SLC36A4Q6YBV0 504 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 DGLUCYQ7Z3D6 616 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 NOP9Q86U38 636 aaKnown RBP17.55■□□□□ 0.4
HOXD8-204ENST00000544999 MFN1Q8IWA4 741 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 FRMD1Q8N878 549 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 FIBINQ8TAL6 211 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 WFDC5Q8TCV5 224 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 SORCS1Q8WY21 1168 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 RTKNQ9BST9 563 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 FAM204AQ9H8W3 233 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 STIM2Q9P246 746 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 SLC12A6Q9UHW9 1150 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 XPO7Q9UIA9 1087 aaKnown RBP17.55■□□□□ 0.4
HOXD8-204ENST00000544999 SIK3Q9Y2K2 1263 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 ZNF292O60281 2723 aa17.55■□□□□ 0.4
HOXD8-204ENST00000544999 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.54■□□□□ 0.4
HOXD8-204ENST00000544999 LRRC10BA6NIK2 292 aa17.54■□□□□ 0.4
HOXD8-204ENST00000544999 LGALS16A8MUM7 142 aa17.54■□□□□ 0.4
HOXD8-204ENST00000544999 SYNCRIPO60506 623 aaKnown RBP17.54■□□□□ 0.4
HOXD8-204ENST00000544999 LSM8O95777 96 aaKnown RBP17.54■□□□□ 0.4
HOXD8-204ENST00000544999 ZNF18P17022 549 aa17.54■□□□□ 0.4
HOXD8-204ENST00000544999 TACR2P21452 398 aa17.54■□□□□ 0.4
HOXD8-204ENST00000544999 NOS2P35228 1153 aa17.54■□□□□ 0.4
HOXD8-204ENST00000544999 SCNN1AP37088 669 aa17.54■□□□□ 0.4
HOXD8-204ENST00000544999 GABRB2P47870 512 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms