RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZNF217O75362 1048 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 DAB1O75553 588 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 IGLV3-25P01717 112 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 ATP5BP06576 529 aaKnown RBP12.26□□□□□ -0.45
HDAC4-216ENST00000544989 NOS2P35228 1153 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 SOX5P35711 763 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 DPP6P42658 865 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 TPM4P67936 248 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 ANO6Q4KMQ2 910 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 TTC39BQ5VTQ0 682 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-216ENST00000544989 SYPL2Q5VXT5 272 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 EGFLAMQ63HQ2 1017 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 RNF43Q68DV7 783 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 OLFML1Q6UWY5 402 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 TMEM92Q6UXU6 159 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 TAC4Q86UU9 113 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 ERICH1Q86X53 443 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 SFTPA1Q8IWL2 248 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 AHI1Q8N157 1196 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 FAM160A2Q8N612 972 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-216ENST00000544989 AOPEPQ8N6M6 819 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.26□□□□□ -0.45
HDAC4-216ENST00000544989 MDGA1Q8NFP4 955 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 HMGB4Q8WW32 186 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 RNF34Q969K3 372 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 RMDN1Q96DB5 314 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 C18orf8Q96DM3 657 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 FAM204AQ9H8W3 233 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 ELOVL2Q9NXB9 296 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 DLL3Q9NYJ7 618 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 THAP10Q9P2Z0 257 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-216ENST00000544989 TJP2Q9UDY2 1190 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 USP18Q9UMW8 372 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 PLA2G4CQ9UP65 541 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 SIK3Q9Y2K2 1263 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 ANKRD11Q6UB99 2663 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-216ENST00000544989 SPAG17Q6Q759 2223 aa12.26□□□□□ -0.45
HDAC4-216ENST00000544989 TRIM24O15164 1050 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 SYNCRIPO60506 623 aaKnown RBP12.25□□□□□ -0.45
HDAC4-216ENST00000544989 TSPAN3O60637 253 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 EPN2O95208 641 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 F9P00740 461 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 PNMA6AP0CW24 399 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-216ENST00000544989 ZNF165P49910 485 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 OXCT1P55809 520 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 JAM2P57087 298 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 CDR2Q01850 454 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 SRSF5Q13243 272 aaKnown RBP12.25□□□□□ -0.45
HDAC4-216ENST00000544989 NCAPHQ15003 741 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 SYCP1Q15431 976 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 CSRP2Q16527 193 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 LPAL2Q16609 132 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 PLK5Q496M5 336 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 PTPN20Q4JDL3 420 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 FAM133BQ5BKY9 247 aaKnown RBP12.25□□□□□ -0.45
HDAC4-216ENST00000544989 SLC36A4Q6YBV0 504 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 FAM183BPQ6ZVS7 135 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 SND1Q7KZF4 910 aaKnown RBP eCLIP12.25□□□□□ -0.453e-6■■■□□ 15.6
HDAC4-216ENST00000544989 ARCQ7LC44 396 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 KBTBD6Q86V97 674 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 MFN1Q8IWA4 741 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 KIAA2013Q8IYS2 634 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 DEFB106AQ8N104 65 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 PGBD3Q8N328 593 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 OLIG1Q8TAK6 271 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 EPS8L1Q8TE68 723 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 DDX1Q92499 740 aaKnown RBP12.25□□□□□ -0.45
HDAC4-216ENST00000544989 PPP1R9BQ96SB3 815 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 CIPCQ9C0C6 399 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 FBRSQ9HAH7 460 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 POLR3BQ9NW08 1133 aaPredicted RBP12.25□□□□□ -0.45
HDAC4-216ENST00000544989 DDIT4Q9NX09 232 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 FAM208BQ5VWN6 2430 aa12.25□□□□□ -0.45
HDAC4-216ENST00000544989 KCNU1A8MYU2 1149 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 F5H5T6 163 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 TBL1XO60907 577 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 GFPT2O94808 682 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 MOCS3O95396 460 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 MOCS2O96007 188 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 ERBB2P04626 1255 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 PABPC1P11940 636 aaKnown RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 POLR2EP19388 210 aaKnown RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 P2RY2P41231 377 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 MATKP42679 507 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 EIF4EBP2Q13542 120 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 CDH18Q13634 790 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 ENPP2Q13822 863 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 GEN1Q17RS7 908 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 SKOR2Q2VWA4 1001 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 ZC3H12AQ5D1E8 599 aaKnown RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 MS4A13Q5J8X5 152 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 RABGAP1LQ5R372 815 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 TAF3Q5VWG9 929 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 PPP1R2P3Q6NXS1 205 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 RFWD3Q6PCD5 774 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 KIAA0907Q7Z7F0 614 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 NOP9Q86U38 636 aaKnown RBP12.24□□□□□ -0.45
HDAC4-216ENST00000544989 DCLK2Q8N568 766 aa12.24□□□□□ -0.45
HDAC4-216ENST00000544989 FIBINQ8TAL6 211 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms