RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 EPS15L1Q9UBC2 864 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-222ENST00000544585 WASF3Q9UPY6 502 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 PCDHB1Q9Y5F3 818 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 PCDHA10Q9Y5I2 948 aa6.71□□□□□ -1.34
CPSF7-222ENST00000544585 FNDC1Q4ZHG4 1894 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 PLXNA4Q9HCM2 1894 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CCDC195A0A1B0GUA6 201 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CCDC69A6NI79 296 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 FOXN3O00409 490 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 FRS3O43559 492 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 ZNF623O75123 536 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 ZC3H11AO75152 810 aaKnown RBP eCLIP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 DARSP14868 501 aaKnown RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 STAT5AP42229 794 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CCT5P48643 541 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 RENBPP51606 427 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CLCN4P51793 760 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CASP5P51878 434 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 STARD6P59095 220 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 RNASELQ05823 741 aaKnown RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 PPP3CAQ08209 521 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 MGAT5Q09328 741 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 ITGB3BPQ13352 177 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 UBE2SQ16763 222 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 NOMO2Q5JPE7 1267 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 IZUMO3Q5VZ72 239 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 DCLRE1AQ6PJP8 1040 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CASC1Q6TDU7 716 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 GLB1LQ6UWU2 654 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 NFXL1Q6ZNB6 911 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 TMC6Q7Z403 805 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CHD1LQ86WJ1 897 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 MIB1Q86YT6 1006 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 CCDC60Q8IWA6 550 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 NKAPQ8N5F7 415 aaKnown RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 GPR156Q8NFN8 814 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 ATRIPQ8WXE1 791 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 FAM167AQ96KS9 214 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 NT5C1BQ96P26 610 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 NELL2Q99435 816 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 GCOM2Q9BZD3 368 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 OSBPL6Q9BZF3 934 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 NRDE2Q9H7Z3 1164 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 ZMAT3Q9HA38 289 aaKnown RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 TBC1D17Q9HA65 648 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 RIC8AQ9NPQ8 531 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 TDP1Q9NUW8 608 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 DLGAP2Q9P1A6 1054 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 NCDNQ9UBB6 729 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 FBXO4Q9UKT5 387 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 PADI4Q9UM07 663 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 ZFP37Q9Y6Q3 630 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-222ENST00000544585 DGKBQ9Y6T7 804 aa6.7□□□□□ -1.34
CPSF7-222ENST00000544585 KMT2BQ9UMN6 2715 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 A0A1W2PPL8 197 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 SMCO2A6NFE2 343 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 H3BUI4 141 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 hCG_1984214I3L0E3 225 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 DDX39AO00148 427 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 IPO5O00410 1097 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 NCAM2O15394 837 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 PHGDHO43175 533 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 LAMTOR5O43504 91 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 SGTAO43765 313 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 NARSO43776 548 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 CCNE2O96020 404 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 DCNP07585 359 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 CYP3A4P08684 503 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 CNPP09543 421 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 LAMP2P13473 410 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 ABCB4P21439 1286 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 MCM5P33992 734 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 LIFRP42702 1097 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 MAGEA9P43362 315 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 STT3AP46977 705 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 GPC3P51654 580 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 HK3P52790 923 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 ERVFRD-1P60508 538 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 PRR16Q569H4 304 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 FAM209BQ5JX69 171 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 SPECC1Q5M775 1068 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 SYNE3Q6ZMZ3 975 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 TRMT1LQ7Z2T5 733 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 ZC3H18Q86VM9 953 aaKnown RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 MB21D2Q8IYB1 491 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 ZNF713Q8N859 430 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-222ENST00000544585 OR2I1PQ8NGU4 316 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 SLC35A4Q96G79 324 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 PPP1R16BQ96T49 567 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 TMEM175Q9BSA9 504 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 PLEKHA4Q9H4M7 779 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 LY9Q9HBG7 655 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 ARHGEF3Q9NR81 526 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 SLC2A4RGQ9NR83 387 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 LMBRD1Q9NUN5 540 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 TBC1D13Q9NVG8 400 aa6.69□□□□□ -1.34
CPSF7-222ENST00000544585 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms