RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 F11P03951 625 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 KRT1P04264 644 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 SP9P0CG40 484 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 GABRR2P28476 465 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 HTR7P34969 479 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 PTPN7P35236 360 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 PEX5P50542 639 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 ATXN1P54253 815 aaKnown RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 TAS2R40P59535 323 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 TUBB4BP68371 445 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 AMPD2Q01433 879 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 SLC25A11Q02978 314 aaKnown RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 SCAPQ12770 1279 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 NME3Q13232 169 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 TRIP4Q15650 581 aaPredicted RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 EFHC2Q5JST6 749 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 ERMARDQ5T6L9 678 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 NUGGCQ68CJ6 796 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 PDZD4Q76G19 769 aaPredicted RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 TAC4Q86UU9 113 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 UNC45BQ8IWX7 931 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 C12orf76Q8N812 135 aaPredicted RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 ATP6V0D2Q8N8Y2 350 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 SUMF1Q8NBK3 374 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 KCTD6Q8NC69 237 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 ACTRT1Q8TDG2 376 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 WDCPQ9H6R7 721 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 PIDD1Q9HB75 910 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 IGSF9Q9P2J2 1179 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 RCOR3Q9P2K3 495 aaPredicted RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 PCSK1NQ9UHG2 260 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 TTC7AQ9ULT0 858 aaPredicted RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 PACSIN2Q9UNF0 486 aaPredicted RBP9.87□□□□□ -0.83
YBX3-215ENST00000544504 EFR3BQ9Y2G0 817 aa9.87□□□□□ -0.83
YBX3-215ENST00000544504 USP24Q9UPU5 2620 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 TRAV19A0A0A6YYK7 116 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 GOLGA6L10A0A0M3HER8 536 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 CCDC195A0A1B0GUA6 201 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 LRRD1A4D1F6 860 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 PRR5-ARHGAP8B1AHC4 643 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 PGRMC1O00264 195 aaKnown RBP9.86□□□□□ -0.83
YBX3-215ENST00000544504 CEP104O60308 925 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 OAS1P00973 400 aaKnown RBP9.86□□□□□ -0.83
YBX3-215ENST00000544504 RARAP10276 462 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 MYL4P12829 197 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 ADRA1BP35368 520 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 GJC1P36383 396 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 ARL4AP40617 200 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 DNA2P51530 1060 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 TBX4P57082 545 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 ARHGAP8P85298 464 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 EFEMP1Q12805 493 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 KRT81Q14533 505 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 PPP2R5EQ16537 467 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 TFDP3Q5H9I0 405 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 TMC5Q6UXY8 1006 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 DDX42Q86XP3 938 aaKnown RBP eCLIP9.86□□□□□ -0.83
YBX3-215ENST00000544504 CCDC50Q8IVM0 306 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 C1orf210Q8IVY1 113 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 RASGEF1CQ8N431 466 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 ARFGAP1Q8N6T3 406 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 CEP112Q8N8E3 955 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 SMG7Q92540 1137 aaKnown RBP9.86□□□□□ -0.83
YBX3-215ENST00000544504 KRT35Q92764 455 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 PLD4Q96BZ4 506 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 HAPLN3Q96S86 360 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 DDX50Q9BQ39 737 aaKnown RBP9.86□□□□□ -0.83
YBX3-215ENST00000544504 CORO1BQ9BR76 489 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 DCLK3Q9C098 648 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 ATXN3LQ9H3M9 355 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 ZWILCHQ9H900 591 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 IL21Q9HBE4 155 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 WDR6Q9NNW5 1121 aaKnown RBP9.86□□□□□ -0.83
YBX3-215ENST00000544504 HOMER3Q9NSC5 361 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 PIGVQ9NUD9 493 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 DONSONQ9NYP3 566 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 NCDNQ9UBB6 729 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 RASAL2Q9UJF2 1139 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 CDV3Q9UKY7 258 aaKnown RBP9.86□□□□□ -0.83
YBX3-215ENST00000544504 AP4E1Q9UPM8 1137 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 MRFAP1Q9Y605 127 aa9.86□□□□□ -0.83
YBX3-215ENST00000544504 SPEGQ15772 3267 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 SYNJ2BP-COX16A0A087WUM0 186 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 SLC12A8A0AV02 714 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 KRBA1A5PL33 1030 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 H3BRJ5 948 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 TJP3O95049 919 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 LATS1O95835 1130 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 RHOP08100 348 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 ADRB1P08588 477 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 ZFXP17010 805 aaPredicted RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 KDELR1P24390 212 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 HARS2P49590 506 aaKnown RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 CDH6P55285 790 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 LMNB2Q03252 620 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 EIF4EBP2Q13542 120 aaPredicted RBP9.85□□□□□ -0.83
YBX3-215ENST00000544504 TFDP2Q14188 446 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 DPYSL2Q16555 572 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 SH3PXD2AQ5TCZ1 1133 aa9.85□□□□□ -0.83
YBX3-215ENST00000544504 OTUD1Q5VV17 481 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms