RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 OGFOD2Q6N063 350 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 IFNEQ86WN2 208 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 PPIL6Q8IXY8 311 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SPATA6LQ8N4H0 392 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SEPT9Q9UHD8 586 aaPredicted RBP13.19□□□□□ -0.3
PDZD4-209ENST00000544474 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 POMPQ9Y244 141 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
PDZD4-209ENST00000544474 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
PDZD4-209ENST00000544474 MAPTP10636 758 aaKnown RBP13.18□□□□□ -0.3
PDZD4-209ENST00000544474 P4HA1P13674 534 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 RAP1GAPP47736 663 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 SLC5A3P53794 718 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 GTF2BQ00403 316 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
PDZD4-209ENST00000544474 WDR78Q5VTH9 848 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 FAM219BQ5XKK7 198 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 TMEM198Q66K66 360 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 PDPK2PQ6A1A2 396 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 GPAT2Q6NUI2 795 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 AAGABQ6PD74 315 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 RNF111Q6ZNA4 994 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 PRR23BQ6ZRT6 265 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 FRMD7Q6ZUT3 714 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 DDX1Q92499 740 aaKnown RBP13.18□□□□□ -0.3
PDZD4-209ENST00000544474 SKA1Q96BD8 255 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 APOPT1Q96IL0 206 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 SLITRK1Q96PX8 696 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 NEURL2Q9BR09 285 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 SLC24A2Q9UI40 661 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
PDZD4-209ENST00000544474 A8MU76 341 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 CDH2P19022 906 aaPredicted RBP13.18□□□□□ -0.3
PDZD4-209ENST00000544474 EPHA3P29320 983 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 RGS7P49802 495 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 FOXD4Q12950 439 aaPredicted RBP13.18□□□□□ -0.3
PDZD4-209ENST00000544474 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 PERM1Q5SV97 790 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 SH3PXD2AQ5TCZ1 1133 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 CMC1Q7Z7K0 106 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 RCOR2Q8IZ40 523 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 SCYL1Q96KG9 808 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 STRA6Q9BX79 667 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 CEP44Q9C0F1 390 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 PIF1Q9H611 641 aa13.18□□□□□ -0.3
PDZD4-209ENST00000544474 SAC3D1A6NKF1 404 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 C9JVG2 144 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 USP12O75317 370 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 MT-ND1P03886 318 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 FDFT1P37268 417 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 MORF4L2Q15014 288 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 NEDD8Q15843 81 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 RNASEH2BQ5TBB1 312 aaKnown RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 N4BP2L1Q5TBK1 243 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ADGRG6Q86SQ4 1221 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 SNX32Q86XE0 403 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 EXOC8Q8IYI6 725 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ALLCQ8N6M5 410 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 BHLHE22Q8NFJ8 381 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TRPC5Q9UL62 973 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ZBTB7AO95365 584 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 EGFRP00533 1210 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 SNRPAP09012 282 aaKnown RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 UNGP13051 313 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ZNF12P17014 697 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ADRA2BP18089 450 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 MAGP20916 626 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 KLRC2P26717 231 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TYK2P29597 1187 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 UGCGQ16739 394 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 PITRM1Q5JRX3 1037 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 LGSNQ5TDP6 509 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 PLEKHA7Q6IQ23 1121 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 UBA3Q8TBC4 463 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 BTBD9Q96Q07 612 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ZNF341Q9BYN7 854 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 PLK2Q9NYY3 685 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 FAM149AA5PLN7 773 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 TRIM64CA6NLI5 447 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 S100BP04271 92 aaPredicted RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ITGB5P18084 799 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ENDOUP21128 410 aaKnown RBP13.17□□□□□ -0.3
PDZD4-209ENST00000544474 ADSSP30520 456 aa13.17□□□□□ -0.3
PDZD4-209ENST00000544474 NPTX2P47972 431 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms