RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 XPO6Q96QU8 1125 aaKnown RBP19.84■□□□□ 0.77
DDX55-211ENST00000544429 PRRX2Q99811 253 aa19.84■□□□□ 0.77
DDX55-211ENST00000544429 ANLNQ9NQW6 1124 aa19.84■□□□□ 0.77
DDX55-211ENST00000544429 PLK2Q9NYY3 685 aa19.84■□□□□ 0.77
DDX55-211ENST00000544429 DEC1Q9P2X7 70 aa19.84■□□□□ 0.77
DDX55-211ENST00000544429 SLC27A6Q9Y2P4 619 aa19.84■□□□□ 0.77
DDX55-211ENST00000544429 CHURC1-FNTBB4DL54 471 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 TRIM24O15164 1050 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 KAT7O95251 611 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 PDGFRAP16234 1089 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 NME3Q13232 169 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 MAPK8IP2Q13387 824 aaPredicted RBP19.83■□□□□ 0.77
DDX55-211ENST00000544429 MAMLD1Q13495 774 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 MS4A13Q5J8X5 152 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 RFWD3Q6PCD5 774 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 DNAAF5Q86Y56 855 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 C1orf210Q8IVY1 113 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 TERB1Q8NA31 727 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 PRSS33Q8NF86 280 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 DDX50Q9BQ39 737 aaKnown RBP19.83■□□□□ 0.77
DDX55-211ENST00000544429 SLC2A11Q9BYW1 496 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 PRMT8Q9NR22 394 aaPredicted RBP19.83■□□□□ 0.77
DDX55-211ENST00000544429 ARHGEF4Q9NR80 690 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 CLEC4EQ9ULY5 219 aa19.83■□□□□ 0.77
DDX55-211ENST00000544429 ARIH1Q9Y4X5 557 aaPredicted RBP19.83■□□□□ 0.77
DDX55-211ENST00000544429 FANCMQ8IYD8 2048 aa19.83■□□□□ 0.76
DDX55-211ENST00000544429 DOCK4Q8N1I0 1966 aa19.83■□□□□ 0.76
DDX55-211ENST00000544429 SSU72P8A0A1W2PR75 194 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 TMCO5BA8MYB1 307 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 PAPSS2O95340 614 aaPredicted RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 CYBBP04839 570 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 TNFRSF4P43489 277 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 KIR2DL1P43626 348 aaPredicted RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 ATXN1P54253 815 aaKnown RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 ADKP55263 362 aaKnown RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 RPL7AP62424 266 aaKnown RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 DEUP1Q05D60 604 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 TCF15Q12870 199 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 PREPLQ4J6C6 727 aaPredicted RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 DNAJC24Q6P3W2 148 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 PKN3Q6P5Z2 889 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 STRADAQ7RTN6 431 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 TMC6Q7Z403 805 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 CNGA4Q8IV77 575 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 SPEM1Q8N4L4 309 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 ATP6V0D2Q8N8Y2 350 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 TC2NQ8N9U0 490 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 BHMTQ93088 406 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 TMA16Q96EY4 203 aaKnown RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 SELENOOQ9BVL4 669 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 DNAJC17Q9NVM6 304 aaKnown RBP19.82■□□□□ 0.76
DDX55-211ENST00000544429 HCN2Q9UL51 889 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 STARD13Q9Y3M8 1113 aa19.82■□□□□ 0.76
DDX55-211ENST00000544429 SYNJ2BP-COX16A0A087WUM0 186 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 ANTXRLA6NF34 631 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 TSPAN3O60637 253 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 RNF40O75150 1001 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 PAGE1O75459 146 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 ADCY5O95622 1261 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 MOCS2O96007 188 aaPredicted RBP19.81■□□□□ 0.76
DDX55-211ENST00000544429 APODP05090 189 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 MYBL1P10243 752 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 ABCB4P21439 1286 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 SDC4P31431 198 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 RDXP35241 583 aaKnown RBP19.81■□□□□ 0.76
DDX55-211ENST00000544429 DGKGP49619 791 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 KDSRQ06136 332 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 C15orf59Q2T9L4 293 aaPredicted RBP19.81■□□□□ 0.76
DDX55-211ENST00000544429 C5orf22Q49AR2 442 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 RAB6CQ53S08 254 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 SH3PXD2AQ5TCZ1 1133 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 GRAMD4Q6IC98 578 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 KIAA0907Q7Z7F0 614 aaPredicted RBP19.81■□□□□ 0.76
DDX55-211ENST00000544429 VPS36Q86VN1 386 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 ZNF683Q8IZ20 524 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 USP33Q8TEY7 942 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 DDI1Q8WTU0 396 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 RAB6CQ9H0N0 254 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 WDCPQ9H6R7 721 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 PARVAQ9NVD7 372 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 C2orf42Q9NWW7 574 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 COX16Q9P0S2 106 aa19.81■□□□□ 0.76
DDX55-211ENST00000544429 AKR1B15C9JRZ8 316 aaPredicted RBP19.8■□□□□ 0.76
DDX55-211ENST00000544429 TPM1P09493 284 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 TDGF1P13385 188 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 COL9A1P20849 921 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 TACR2P21452 398 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 GPD1P21695 349 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 EIF4A3P38919 411 aaKnown RBP19.8■□□□□ 0.76
DDX55-211ENST00000544429 ZNF143P52747 638 aaPredicted RBP19.8■□□□□ 0.76
DDX55-211ENST00000544429 HDAC4P56524 1084 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 OGDHQ02218 1023 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 SLC18A3Q16572 532 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 RAP1GAP2Q684P5 730 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.8■□□□□ 0.76
DDX55-211ENST00000544429 HJURPQ8NCD3 748 aaPredicted RBP19.8■□□□□ 0.76
DDX55-211ENST00000544429 CCDC26Q8TAB7 109 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 KCNV2Q8TDN2 545 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 NELL1Q92832 810 aa19.8■□□□□ 0.76
DDX55-211ENST00000544429 TRIM11Q96F44 468 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms