RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ALLCQ8N6M5 410 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 IFT81Q8WYA0 676 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 MSRAQ9UJ68 235 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 NEU2Q9Y3R4 380 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 LRIG2O94898 1065 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 MOCS2O96007 188 aaPredicted RBP31.46■■■□□ 2.63
CCM2-219ENST00000544363 MYBL2P10244 700 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 DRG2P55039 364 aaKnown RBP31.46■■■□□ 2.63
CCM2-219ENST00000544363 CUL1Q13616 776 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 PTK6Q13882 451 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 RAB30Q15771 203 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 PABPC1LQ4VXU2 614 aaKnown RBP31.46■■■□□ 2.63
CCM2-219ENST00000544363 GSTA5Q7RTV2 222 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 TMEM150AQ86TG1 271 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 ELMOD1Q8N336 334 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 ATP6V0D2Q8N8Y2 350 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 HNRNPLLQ8WVV9 542 aaKnown RBP31.46■■■□□ 2.63
CCM2-219ENST00000544363 TRIM31Q9BZY9 425 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 NACA2Q9H009 215 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 DPH5Q9H2P9 285 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 NKX2-4Q9H2Z4 354 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 IL21Q9HBE4 155 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 FAM114A2Q9NRY5 505 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 SLC12A6Q9UHW9 1150 aa31.46■■■□□ 2.63
CCM2-219ENST00000544363 DCLK1O15075 740 aa31.45■■■□□ 2.62
CCM2-219ENST00000544363 COCHO43405 550 aa31.45■■■□□ 2.62
CCM2-219ENST00000544363 CLASP2O75122 1294 aaKnown RBP31.45■■■□□ 2.62
CCM2-219ENST00000544363 RBP3P10745 1247 aa31.45■■■□□ 2.62
CCM2-219ENST00000544363 PPM1LQ5SGD2 360 aa31.45■■■□□ 2.62
CCM2-219ENST00000544363 C1orf74Q96LT6 269 aa31.45■■■□□ 2.62
CCM2-219ENST00000544363 TMEM121Q9BTD3 319 aa31.45■■■□□ 2.62
CCM2-219ENST00000544363 XPO7Q9UIA9 1087 aaKnown RBP31.45■■■□□ 2.62
CCM2-219ENST00000544363 MTCL1Q9Y4B5 1905 aaKnown RBP31.45■■■□□ 2.62
CCM2-219ENST00000544363 OAS1P00973 400 aaKnown RBP31.44■■■□□ 2.62
CCM2-219ENST00000544363 ERCC2P18074 760 aa31.44■■■□□ 2.62
CCM2-219ENST00000544363 HTR7P34969 479 aa31.44■■■□□ 2.62
CCM2-219ENST00000544363 GGCXP38435 758 aa31.44■■■□□ 2.62
CCM2-219ENST00000544363 NRG1Q02297 640 aaPredicted RBP31.44■■■□□ 2.62
CCM2-219ENST00000544363 GBE1Q04446 702 aa31.44■■■□□ 2.62
CCM2-219ENST00000544363 DDX42Q86XP3 938 aaKnown RBP eCLIP31.44■■■□□ 2.62
CCM2-219ENST00000544363 EIF1ADQ8N9N8 165 aaKnown RBP31.44■■■□□ 2.62
CCM2-219ENST00000544363 CERS4Q9HA82 394 aa31.44■■■□□ 2.62
CCM2-219ENST00000544363 MFHAS1Q9Y4C4 1052 aa31.44■■■□□ 2.62
CCM2-219ENST00000544363 HS3ST4Q9Y661 456 aa31.44■■■□□ 2.62
CCM2-219ENST00000544363 H0YGN5 161 aa31.43■■■□□ 2.62
CCM2-219ENST00000544363 HMBSP08397 361 aa31.43■■■□□ 2.62
CCM2-219ENST00000544363 MLLT6P55198 1093 aaPredicted RBP31.43■■■□□ 2.62
CCM2-219ENST00000544363 SLC10A2Q12908 348 aaPredicted RBP31.43■■■□□ 2.62
CCM2-219ENST00000544363 PAFAH1B3Q15102 231 aaKnown RBP31.43■■■□□ 2.62
CCM2-219ENST00000544363 ZC3H18Q86VM9 953 aaKnown RBP31.43■■■□□ 2.62
CCM2-219ENST00000544363 BTN2A3PQ96KV6 586 aa31.43■■■□□ 2.62
CCM2-219ENST00000544363 LRRC3Q9BY71 257 aa31.43■■■□□ 2.62
CCM2-219ENST00000544363 CEP290O15078 2479 aa31.43■■■□□ 2.62
CCM2-219ENST00000544363 EPHB2P29323 1055 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 MAP9Q49MG5 647 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 MANEALQ5VSG8 457 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 TMC8Q8IU68 726 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 GSPT2Q8IYD1 628 aaKnown RBP31.42■■■□□ 2.62
CCM2-219ENST00000544363 MAN1C1Q9NR34 630 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 DTLQ9NZJ0 730 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 NFU1Q9UMS0 254 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 SNX24Q9Y343 169 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 C2orf78A6NCI8 922 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 H7C0C1 242 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 SGK1O00141 431 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 KRT14P02533 472 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 SRGAP2BP0DMP2 458 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 ATP5OP48047 213 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 MTA1Q13330 715 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 XRCC4Q13426 336 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 PIK3R6Q5UE93 754 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 PPP2R2DQ66LE6 453 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 NUGGCQ68CJ6 796 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 DARS2Q6PI48 645 aaKnown RBP31.42■■■□□ 2.62
CCM2-219ENST00000544363 BZW1Q7L1Q6 419 aaKnown RBP31.42■■■□□ 2.62
CCM2-219ENST00000544363 SLC22A17Q8WUG5 538 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 C10orf88Q9H8K7 445 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 ARFGAP3Q9NP61 516 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 ASIC3Q9UHC3 531 aa31.42■■■□□ 2.62
CCM2-219ENST00000544363 ANAPC1Q9H1A4 1944 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 CCL16O15467 120 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 HOXC13P31276 330 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 RPL21P46778 160 aaKnown RBP31.41■■■□□ 2.62
CCM2-219ENST00000544363 COG7P83436 770 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 TRIP13Q15645 432 aaPredicted RBP31.41■■■□□ 2.62
CCM2-219ENST00000544363 TMCO3Q6UWJ1 677 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 UNC45BQ8IWX7 931 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 HS6ST3Q8IZP7 471 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 CCDC89Q8N998 374 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 RSAD2Q8WXG1 361 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 RNF38Q9H0F5 515 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 NEU3Q9UQ49 428 aa31.41■■■□□ 2.62
CCM2-219ENST00000544363 MFSD11O43934 449 aa31.4■■■□□ 2.62
CCM2-219ENST00000544363 MAP3K6O95382 1288 aa31.4■■■□□ 2.62
CCM2-219ENST00000544363 GABRR2P28476 465 aa31.4■■■□□ 2.62
CCM2-219ENST00000544363 ARTNQ5T4W7 220 aa31.4■■■□□ 2.62
CCM2-219ENST00000544363 ACBD5Q5T8D3 534 aaPredicted RBP31.4■■■□□ 2.62
CCM2-219ENST00000544363 PDZD4Q76G19 769 aaPredicted RBP31.4■■■□□ 2.62
CCM2-219ENST00000544363 CCHCR1Q8TD31 782 aa31.4■■■□□ 2.62
CCM2-219ENST00000544363 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP31.4■■■□□ 2.621e-6■■■■■ 58.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms