RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 LACRTQ9GZZ8 138 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 ZFYVE16Q7Z3T8 1539 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 TMEM114B3SHH9 223 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 GHRP10912 638 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 LSM3P62310 102 aaKnown RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 MRPS22P82650 360 aaKnown RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 ITFG1Q8TB96 612 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 C15orf41Q9Y2V0 281 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 PCDHGA4Q9Y5G9 962 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 KCNQ2O43526 872 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 ENO2P09104 434 aaPredicted RBP15.79■□□□□ 0.12
CHD4-210ENST00000544040 SSTR1P30872 391 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 CLCN3P51790 818 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 KCNMB4Q86W47 210 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 LRRN4CLQ8ND94 238 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 TMEM39BQ9GZU3 492 aa15.79■□□□□ 0.12
CHD4-210ENST00000544040 GNASQ5JWF2 1037 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 RD3Q7Z3Z2 195 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 PACS2Q86VP3 889 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 CENPIQ92674 756 aaPredicted RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 SLC5A5Q92911 643 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 SLITRK2Q9H156 845 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 LYVE1Q9Y5Y7 322 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 A8MX80 341 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 SERPINE1P05121 402 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ETS1P14921 441 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 SNAPC2Q13487 334 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ANGEL2Q5VTE6 544 aaKnown RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 FBXO39Q8N4B4 442 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 EDEM1Q92611 657 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ATG4CQ96DT6 458 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 L2HGDHQ9H9P8 463 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 PROCP04070 461 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ZNF157P51786 506 aaPredicted RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 GRTP1Q5TC63 336 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 USP7Q93009 1102 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 TINF2Q9BSI4 451 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ADGRE3Q9BY15 652 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 RRN3P2A6NIE6 340 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 CES2O00748 559 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 RPL21P46778 160 aaKnown RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 BOP1Q14137 746 aaKnown RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 CCNG2Q16589 344 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 KLHL12Q53G59 568 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 PERM1Q5SV97 790 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 PRMT9Q6P2P2 845 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ZNF621Q6ZSS3 439 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ERO1BQ86YB8 467 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 FAM126BQ8IXS8 530 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 DHRSXQ8N5I4 330 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 WDR41Q9HAD4 459 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ADPRHL2Q9NX46 363 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ZNF222Q9UK12 451 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 NPHP4O75161 1426 aaPredicted RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 C19orf81C9J6K1 198 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 HLA-DQA2P01906 255 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 STAG3L1P0CL83 205 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 MUTP22033 750 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ALDH5A1P51649 535 aaPredicted RBP15.78■□□□□ 0.12
CHD4-210ENST00000544040 CAVIN3Q969G5 261 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 ARHGEF40Q8TER5 1519 aa15.78■□□□□ 0.12
CHD4-210ENST00000544040 IDH3BO43837 385 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 PROSCO94903 275 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 MSH3P20585 1137 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 CD151P48509 253 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 PCDH20Q8N6Y1 951 aaKnown RBP15.77■□□□□ 0.12
CHD4-210ENST00000544040 FBXO30Q8TB52 745 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 DCLK3Q9C098 648 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 MBD2Q9UBB5 411 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 PPIEQ9UNP9 301 aaKnown RBP15.77■□□□□ 0.12
CHD4-210ENST00000544040 LRCH1Q9Y2L9 728 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 CHURC1-FNTBB4DL54 471 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 AHCYL1O43865 530 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 CKMP06732 381 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 SOX10P56693 466 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 CIPCQ9C0C6 399 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 RBM22Q9NW64 420 aaKnown RBP eCLIP15.77■□□□□ 0.127e-6■■■■□ 24.6
CHD4-210ENST00000544040 CDC42BPGQ6DT37 1551 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 PSMD12O00232 456 aaPredicted RBP15.77■□□□□ 0.12
CHD4-210ENST00000544040 BTN3A3O00478 584 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 MYL6P60660 151 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 PRKAA1Q13131 559 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 NDUFAF6Q330K2 333 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 TMC2Q8TDI7 906 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 APOPT1Q96IL0 206 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 APBA2Q99767 749 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 UGT2B28Q9BY64 529 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 ATXN3LQ9H3M9 355 aa15.77■□□□□ 0.12
CHD4-210ENST00000544040 CPT1AP50416 773 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 ATG14Q6ZNE5 492 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 KRT74Q7RTS7 529 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 EMILIN2Q9BXX0 1053 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 SH3GLB1Q9Y371 365 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 RAD51BO15315 384 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 PCDH8O95206 1070 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 BCAT1P54687 386 aa15.77■□□□□ 0.11
CHD4-210ENST00000544040 PURAQ00577 322 aaKnown RBP15.77■□□□□ 0.11
CHD4-210ENST00000544040 RNF44Q7L0R7 432 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms