RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 AOC1P19801 751 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 GALK1P51570 392 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 ZNF143P52747 638 aaPredicted RBP15.65■□□□□ 0.1
CD9-210ENST00000543916 AMPD2Q01433 879 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 ZNF252P-AS1Q0IIN9 211 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 FZD5Q13467 585 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 TMEM196Q5HYL7 178 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 BRMS1LQ5PSV4 323 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 PIK3R6Q5UE93 754 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 RAP1GAP2Q684P5 730 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 ASTLQ6HA08 431 aaPredicted RBP15.65■□□□□ 0.1
CD9-210ENST00000543916 FSTL4Q6MZW2 842 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 C1orf228Q6PIY5 440 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.11e-12■■■□□ 18.5
CD9-210ENST00000543916 STRADAQ7RTN6 431 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 FAM131BQ86XD5 332 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 FAM172AQ8WUF8 416 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 CD101Q93033 1021 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 PRMT1Q99873 361 aaKnown RBP15.65■□□□□ 0.1
CD9-210ENST00000543916 P2RY13Q9BPV8 354 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 LRFN3Q9BTN0 628 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 TKTL2Q9H0I9 626 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 ARHGEF38Q9NXL2 777 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 MRPS17Q9Y2R5 130 aaKnown RBP15.65■□□□□ 0.1
CD9-210ENST00000543916 SIT1Q9Y3P8 196 aa15.65■□□□□ 0.1
CD9-210ENST00000543916 TRIM24O15164 1050 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 TULP3O75386 442 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 CYP1A2P05177 515 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 DCNP07585 359 aaKnown RBP15.64■□□□□ 0.09
CD9-210ENST00000543916 TACR2P21452 398 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 HOXD9P28356 352 aaPredicted RBP15.64■□□□□ 0.09
CD9-210ENST00000543916 GGCXP38435 758 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 EIF2DP41214 584 aaKnown RBP15.64■□□□□ 0.09
CD9-210ENST00000543916 CLCN5P51795 746 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 HDAC4P56524 1084 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 KDSRQ06136 332 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 MS4A13Q5J8X5 152 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 CHSY1Q86X52 802 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 SFTPA1Q8IWL2 248 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 PHTF2Q8N3S3 785 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 TMEM105Q8N8V8 129 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 DDI1Q8WTU0 396 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 EZH1Q92800 747 aaPredicted RBP15.64■□□□□ 0.09
CD9-210ENST00000543916 CNPY3Q9BT09 278 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 OSBPL6Q9BZF3 934 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 WDCPQ9H6R7 721 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 MRPL47Q9HD33 250 aaKnown RBP15.64■□□□□ 0.09
CD9-210ENST00000543916 RBM12Q9NTZ6 932 aaKnown RBP15.64■□□□□ 0.09
CD9-210ENST00000543916 DLGAP2Q9P1A6 1054 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 SLC12A6Q9UHW9 1150 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 HS3ST4Q9Y661 456 aa15.64■□□□□ 0.09
CD9-210ENST00000543916 PAGE1O75459 146 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 EGFP01133 1207 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 CYBBP04839 570 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 H2AFZP0C0S5 128 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 CHRNB1P11230 501 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 CCINQ13939 588 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 MPPE1Q53F39 396 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 H2AFVQ71UI9 128 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 TMEM139Q8IV31 216 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 SUGP1Q8IWZ8 645 aaKnown RBP15.63■□□□□ 0.09
CD9-210ENST00000543916 LGI2Q8N0V4 545 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 PNKPQ96T60 521 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 NELL2Q99435 816 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 DDX50Q9BQ39 737 aaKnown RBP15.63■□□□□ 0.09
CD9-210ENST00000543916 NUP85Q9BW27 656 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 DNAJC17Q9NVM6 304 aaKnown RBP15.63■□□□□ 0.09
CD9-210ENST00000543916 CLEC4EQ9ULY5 219 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 SNX10Q9Y5X0 201 aa15.63■□□□□ 0.09
CD9-210ENST00000543916 SOWAHDA6NJG2 315 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 TBL1XO60907 577 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 CISD3P0C7P0 127 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 TMEM253P0C7T8 217 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 PSMA2P25787 234 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 RPS24P62847 133 aaKnown RBP15.62■□□□□ 0.09
CD9-210ENST00000543916 GRSF1Q12849 480 aaKnown RBP eCLIP15.62■□□□□ 0.09
CD9-210ENST00000543916 ARTNQ5T4W7 220 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 RNF43Q68DV7 783 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 C14orf80Q86SX3 495 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 CCDC170Q8IYT3 715 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 CFAP52Q8N1V2 620 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 CCDC185Q8N715 623 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 HJURPQ8NCD3 748 aaPredicted RBP15.62■□□□□ 0.09
CD9-210ENST00000543916 FNIP1Q8TF40 1166 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 CTNNBL1Q8WYA6 563 aaPredicted RBP15.62■□□□□ 0.09
CD9-210ENST00000543916 CLDN23Q96B33 292 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 TMA16Q96EY4 203 aaKnown RBP15.62■□□□□ 0.09
CD9-210ENST00000543916 XPO6Q96QU8 1125 aaKnown RBP15.62■□□□□ 0.09
CD9-210ENST00000543916 IRX2Q9BZI1 471 aaPredicted RBP15.62■□□□□ 0.09
CD9-210ENST00000543916 SIK2Q9H0K1 926 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 LMAN1LQ9HAT1 526 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 ARHGEF4Q9NR80 690 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 TMEM51Q9NW97 253 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 DEC1Q9P2X7 70 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 FBXO10Q9UK96 956 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 PAXBP1Q9Y5B6 917 aa15.62■□□□□ 0.09
CD9-210ENST00000543916 ANTXRLA6NF34 631 aa15.61■□□□□ 0.09
CD9-210ENST00000543916 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.61■□□□□ 0.09
CD9-210ENST00000543916 F5H5T6 163 aa15.61■□□□□ 0.09
CD9-210ENST00000543916 KAT7O95251 611 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms