RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CTAGE15A4D2H0 777 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 FAM72CH0Y354 149 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 EEF2KO00418 725 aaKnown RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 DAPK3O43293 454 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 CTAGE8P0CG41 777 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 GOT1P17174 413 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 CEBPBP17676 345 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 IL4RP24394 825 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 CORO1AP31146 461 aaKnown RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 AVPR1AP37288 418 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 GGCXP38435 758 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 HCAR3P49019 387 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 SLC11A2P49281 568 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 MLLT6P55198 1093 aaPredicted RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 TPI1P60174 286 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 SEMA3BQ13214 749 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 ANKRD20A8PQ5CZ79 823 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 ACBD5Q5T8D3 534 aaPredicted RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 FAM72AQ5TYM5 149 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 FAM72DQ6L9T8 149 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 SYCE2Q6PIF2 218 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 EP400NLQ6ZTU2 488 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 BBS12Q6ZW61 710 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 ZNF572Q7Z3I7 529 aaPredicted RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 CTAGE6Q86UF2 777 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 FAM72BQ86X60 149 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 CTAGE4Q8IX94 777 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 CMTM8Q8IZV2 173 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 MICALL1Q8N3F8 863 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 SPATA4Q8NEY3 305 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 ING5Q8WYH8 240 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 FAF2Q96CS3 445 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 RPGRIP1Q96KN7 1286 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 C1orf74Q96LT6 269 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 CSPG4P5Q96PW8 444 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 RNF157Q96PX1 679 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 HERPUD2Q9BSE4 406 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 DCLK3Q9C098 648 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 CLDND1Q9NY35 253 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 STIM2Q9P246 746 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 XPO7Q9UIA9 1087 aaKnown RBP11.04□□□□□ -0.64
DDB1-221ENST00000543162 HS3ST4Q9Y661 456 aa11.04□□□□□ -0.64
DDB1-221ENST00000543162 APOL1O14791 398 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 ACSL4O60488 711 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 CST8O60676 142 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 LRIG2O94898 1065 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 SLU7O95391 586 aaKnown RBP11.03□□□□□ -0.64
DDB1-221ENST00000543162 ZFXP17010 805 aaPredicted RBP11.03□□□□□ -0.64
DDB1-221ENST00000543162 FSHRP23945 695 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 HTR7P34969 479 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 DYNLT1P63172 113 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 NRG1Q02297 640 aaPredicted RBP11.03□□□□□ -0.64
DDB1-221ENST00000543162 ITIH3Q06033 890 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 KLF1Q13351 362 aaPredicted RBP11.03□□□□□ -0.64
DDB1-221ENST00000543162 CTC1Q2NKJ3 1217 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 MS4A13Q5J8X5 152 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 PIK3R6Q5UE93 754 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 CES5AQ6NT32 575 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 RWDD4Q6NW29 188 aaKnown RBP11.03□□□□□ -0.64
DDB1-221ENST00000543162 LRRC31Q6UY01 552 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 RFX8Q6ZV50 586 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 CHSY1Q86X52 802 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 DDX42Q86XP3 938 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDB1-221ENST00000543162 DENND1CQ8IV53 801 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 TTC16Q8NEE8 873 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 PCDH19Q8TAB3 1148 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 ITFG1Q8TB96 612 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 AZIN2Q96A70 460 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 ADAM7Q9H2U9 754 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 PRDM16Q9HAZ2 1276 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 CLEC1BQ9P126 229 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 LSM7Q9UK45 103 aaKnown RBP11.03□□□□□ -0.64
DDB1-221ENST00000543162 ARHGAP26Q9UNA1 814 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 C2orf16Q68DN1 1984 aa11.03□□□□□ -0.64
DDB1-221ENST00000543162 E9PAM4 449 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 CCDC188H7C350 402 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 TBX10O75333 385 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 LATS1O95835 1130 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 KLKB1P03952 638 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 TACR2P21452 398 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 AMPD1P23109 780 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 EPHB2P29323 1055 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 ADCY2Q08462 1091 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 C2orf54Q08AI8 447 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 AUHQ13825 339 aaKnown RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 DPYSQ14117 519 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 CBX2Q14781 532 aaPredicted RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 SIX1Q15475 284 aaPredicted RBP11.02□□□□□ -0.65
DDB1-221ENST00000543162 ATAT1Q5SQI0 421 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 MANEALQ5VSG8 457 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 SLC9A4Q6AI14 798 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 NADSYN1Q6IA69 706 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 C14orf80Q86SX3 495 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 PQLC3Q8N755 202 aa11.02□□□□□ -0.65
DDB1-221ENST00000543162 PRELID2Q8N945 189 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms