RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 PPP1R12AO14974 1030 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 ALDH1A2O94788 518 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 AOC1P19801 751 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 MARK2Q7KZI7 788 aaKnown RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 CDKL2Q92772 493 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 MRPL45Q9BRJ2 306 aaKnown RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 STN1Q9H668 368 aaKnown RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 DNAJB4Q9UDY4 337 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 AP4E1Q9UPM8 1137 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 GLRA3O75311 464 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 MLNP12872 115 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 AP2B1P63010 937 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 IRX4P78413 519 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 UBAP2LQ14157 1087 aaKnown RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 TTLL4Q14679 1199 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 STEAP4Q687X5 459 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 ATP2A3Q93084 1043 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 CLPTM1LQ96KA5 538 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 C11orf84Q9BUA3 381 aaPredicted RBP17.09■□□□□ 0.33
KDM2B-216ENST00000543025 SOX13Q9UN79 622 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 SNX9Q9Y5X1 595 aa17.09■□□□□ 0.33
KDM2B-216ENST00000543025 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 GSRP00390 522 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 VTNP04004 478 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 ANPEPP15144 967 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 KCTD2Q14681 263 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 C1orf146Q5VVC0 180 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 MBLAC2Q68D91 279 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 CASC4Q6P4E1 433 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 DENND5BQ6ZUT9 1274 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 MYLK4Q86YV6 388 aaPredicted RBP17.08■□□□□ 0.33
KDM2B-216ENST00000543025 CCDC33Q8N5R6 958 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 LINC01465Q8N7H1 131 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 ZNF483Q8TF39 744 aaPredicted RBP17.08■□□□□ 0.33
KDM2B-216ENST00000543025 CSPG4P5Q96PW8 444 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 DTLQ9NZJ0 730 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 CPA4Q9UI42 421 aa17.08■□□□□ 0.33
KDM2B-216ENST00000543025 DNAJC25-GNG10A0A024R161 153 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 WDR27A2RRH5 827 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 FDFT1P37268 417 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 ATXN1P54253 815 aaKnown RBP17.08■□□□□ 0.32
KDM2B-216ENST00000543025 NIPAL4Q0D2K0 466 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 FAM110CQ1W6H9 321 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 NCBP2-AS2Q69YL0 99 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 HACE1Q8IYU2 909 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.32
KDM2B-216ENST00000543025 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 CENPIQ92674 756 aaPredicted RBP17.08■□□□□ 0.32
KDM2B-216ENST00000543025 SPATS2LQ9NUQ6 558 aaKnown RBP17.08■□□□□ 0.32
KDM2B-216ENST00000543025 MTMR10Q9NXD2 777 aa17.08■□□□□ 0.32
KDM2B-216ENST00000543025 GABBR2O75899 941 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 ALDOAP04075 364 aaKnown RBP17.07■□□□□ 0.32
KDM2B-216ENST00000543025 GSTA3Q16772 222 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 N4BP2L1Q5TBK1 243 aaPredicted RBP17.07■□□□□ 0.32
KDM2B-216ENST00000543025 KBTBD2Q8IY47 623 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 SHCBP1Q8NEM2 672 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 KCTD15Q96SI1 283 aaPredicted RBP17.07■□□□□ 0.32
KDM2B-216ENST00000543025 MMP19Q99542 508 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 APOL6Q9BWW8 343 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 GPAMQ9HCL2 828 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 DNAJC16Q9Y2G8 782 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 A0A0A0MRY4 1105 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 MAGEA13PA6NCF6 341 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 ENO4A6NNW6 628 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 TPP1O14773 563 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 TSPAN1O60635 241 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 FGF3P11487 239 aaPredicted RBP17.07■□□□□ 0.32
KDM2B-216ENST00000543025 ADORA2AP29274 412 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 SLC1A6P48664 564 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 VEGFBP49765 207 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 RPL10AP62906 217 aaKnown RBP17.07■□□□□ 0.32
KDM2B-216ENST00000543025 CRHR2Q13324 411 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 C16orf46Q6P387 395 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 PACS1Q6VY07 963 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 SLC26A9Q7LBE3 791 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 UNC5BQ8IZJ1 945 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 SPATA13Q96N96 652 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 PDGFCQ9NRA1 345 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 NDE1Q9NXR1 346 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 DCDC2Q9UHG0 476 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 EMCNQ9ULC0 261 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 APOBEC2Q9Y235 224 aaKnown RBP17.07■□□□□ 0.32
KDM2B-216ENST00000543025 ASB3Q9Y575 518 aa17.07■□□□□ 0.32
KDM2B-216ENST00000543025 HACD1B0YJ81 288 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 ITM2AO43736 263 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 SMIM24O75264 130 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 FESP07332 822 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 CCNA1P78396 465 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 TUBB3Q13509 450 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 PDE1CQ14123 709 aaPredicted RBP17.06■□□□□ 0.32
KDM2B-216ENST00000543025 TEDDM1Q5T9Z0 273 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 OR52E8Q6IFG1 317 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 LRRC8BQ6P9F7 803 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 CCNJLQ8IV13 435 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 CLEC4CQ8WTT0 213 aa17.06■□□□□ 0.32
KDM2B-216ENST00000543025 GATA6Q92908 595 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms