RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 AGAP5A6NIR3 686 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 MBD3L5A6NJ08 208 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SH2D7A6NKC9 451 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 DRGXA6NNA5 263 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 TMEM232C9JQI7 657 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 M0QYT0 321 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 FFAR3O14843 346 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CTIFO43310 598 aaKnown RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 TNFSF14O43557 240 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 WDR47O94967 919 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 PLA2G1BP04054 148 aaKnown RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CSF1RP07333 972 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SPARCP09486 303 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ACP5P13686 325 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 TNNT1P13805 278 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 MUTP22033 750 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 GCSHP23434 173 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 NFKBIAP25963 317 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 MGAT1P26572 445 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 DPP6P42658 865 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 MTHFSP49914 203 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CDH15P55291 814 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SCARB2Q14108 478 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CLCA4Q14CN2 919 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ACOX1Q15067 660 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CSRP2Q16527 193 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 RNF151Q2KHN1 245 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ZXDCQ2QGD7 858 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ANKRD40Q6AI12 368 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CYP20A1Q6UW02 462 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 FAM47EQ6ZV65 393 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ADGRG6Q86SQ4 1221 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 OR4N4Q8N0Y3 316 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SYNE4Q8N205 404 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ZNF366Q8N895 744 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 KCTD6Q8NC69 237 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SHCBP1Q8NEM2 672 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SCFD2Q8WU76 684 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 JAKMIP2Q96AA8 810 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ZNF512Q96ME7 567 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 NR1H4Q96RI1 486 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 PNKPQ96T60 521 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CPPED1Q9BRF8 314 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 BDH2Q9BUT1 245 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 OR10A4Q9H209 315 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SEMA4BQ9NPR2 832 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 FBXO28Q9NVF7 368 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ARGLU1Q9NWB6 273 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ALKBH4Q9NXW9 302 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 VSX1Q9NZR4 365 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 RAB21Q9UL25 225 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 TRPC5Q9UL62 973 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CORO1CQ9ULV4 474 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 CLCA2Q9UQC9 943 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 DRG1Q9Y295 367 aaKnown RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 FRMD4BQ9Y2L6 1034 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ZDHHC9Q9Y397 364 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 NEU2Q9Y3R4 380 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 PCDHA10Q9Y5I2 948 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ENTPD2Q9Y5L3 495 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 POGZQ7Z3K3 1410 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 MED1Q15648 1581 aaPredicted RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 ARHGEF40Q8TER5 1519 aa4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 RIMS1Q86UR5 1692 aaKnown RBP4.26□□□□□ -1.73
SFSWAP-211ENST00000542813 SOS1Q07889 1333 aaPredicted RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ZCCHC11Q5TAX3 1644 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 PMS2P1A4D2B8 440 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 GAGE10A6NGK3 116 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 UBE2CO00762 179 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CLGNO14967 610 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 TGFB1I1O43294 461 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 DHX16O60231 1041 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ALADP13716 330 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CHN1P15882 459 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 GNAT2P19087 354 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ADORA2AP29274 412 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 PBX1P40424 430 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ARL1P40616 181 aaPredicted RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 EIF2DP41214 584 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 PDE6CP51160 858 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CHN2P52757 468 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 SLURP1P55000 103 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 RBM6P78332 1123 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 MC2RQ01718 297 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 PRPF4BQ13523 1007 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 THOC5Q13769 683 aaKnown RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 PUM1Q14671 1186 aaKnown RBP eCLIP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 AAK1Q2M2I8 961 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ZNF766Q5HY98 468 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 SLC10A5Q5PT55 438 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 NUGGCQ68CJ6 796 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 CCDC144NLQ6NUI1 221 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 DRICH1Q6PGQ1 229 aaPredicted RBP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 RAB11FIP4Q86YS3 637 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 WDTC1Q8N5D0 677 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 C11orf44Q8N8P7 122 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 RFWD2Q8NHY2 731 aa4.25□□□□□ -1.73
SFSWAP-211ENST00000542813 AFAP1L1Q8TED9 768 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms