RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZNF670Q9BS34 389 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 CATSPERBQ9H7T0 1116 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 SARS2Q9NP81 518 aaKnown RBP8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 XPNPEP3Q9NQH7 507 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 PCDHGC3Q9UN70 934 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 FZD1Q9UP38 647 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 LRP5O75197 1615 aa8.42□□□□□ -1.06
PRKAB1-207ENST00000542698 DPPA5A6NC42 116 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 YDJCA8MPS7 323 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 B4GALT5O43286 388 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 EDIL3O43854 480 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 AHCYL1O43865 530 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 B4GALT4O60513 344 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SRP72O76094 671 aaKnown RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ME2P23368 584 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 NAGLUP54802 743 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ROR2Q01974 943 aaKnown RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CACNB2Q08289 660 aaPredicted RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SPANXN3Q5MJ09 141 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GRAMD4Q6IC98 578 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ANKRD13AQ8IZ07 590 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 PLD5Q8N7P1 536 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 MAB21L3Q8N8X9 362 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 BANPQ8N9N5 519 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SLC35B2Q8TB61 432 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 C7orf43Q8WVR3 580 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 USP6NLQ92738 828 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CCDC126Q96EE4 140 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CYP4F12Q9HCS2 524 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 KRT82Q9NSB4 513 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 PKD2L2Q9NZM6 624 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 FETUBQ9UGM5 382 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 F8W8V4 182 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ERBB2P04626 1255 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CFHP08603 1231 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 C1QTNF8P60827 252 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ADIGQ0VDE8 80 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 UBAP2LQ14157 1087 aaKnown RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ADRM1Q16186 407 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 KCNMB4Q86W47 210 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ADGRF2Q8IZF7 708 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GPRC5AQ8NFJ5 357 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CXorf38Q8TB03 319 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 C10orf82Q8WW14 230 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CRYGNQ8WXF5 182 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 DDX1Q92499 740 aaKnown RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 RMDN1Q96DB5 314 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 FAR2Q96K12 515 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CNDP1Q96KN2 507 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CATSPER2Q96P56 530 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 NR1H4Q96RI1 486 aaPredicted RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 UBE2OQ9C0C9 1292 aaKnown RBP8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SLC38A7Q9NVC3 462 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GID8Q9NWU2 228 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 MYH7BA7E2Y1 1941 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CYB561D2O14569 222 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 VNN1O95497 513 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GJB1P08034 283 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 KLRC2P26717 231 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GSTT1P30711 240 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SOX11P35716 441 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ARL2P36404 184 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GRIK1P39086 918 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 TKTL1P51854 596 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GDF10P55107 478 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 OCA2Q04671 838 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 NAB1Q13506 487 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ZNF235Q14590 738 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SPRED3Q2MJR0 410 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 AGKQ53H12 422 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ZFP1Q6P2D0 407 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 UNC5AQ6ZN44 842 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 XYLT1Q86Y38 959 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 GSTCDQ8NEC7 633 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SLC2A14Q8TDB8 520 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 APBA2Q99767 749 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 TXLNGYQ9BZA5 131 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 CCDC90BQ9GZT6 254 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 MROH8Q9H579 483 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 PCDH18Q9HCL0 1135 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 MAN1C1Q9NR34 630 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 APPL1Q9UKG1 709 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 ZNF711Q9Y462 761 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 PCDHA11Q9Y5I1 949 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 SNX5Q9Y5X3 404 aa8.41□□□□□ -1.06
PRKAB1-207ENST00000542698 MYH3P11055 1940 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 E5RI56 91 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 GOLGA8TH3BQL2 631 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 TM7SF2O76062 418 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 UPP2O95045 317 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 ITGA2BP08514 1039 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 CCNB1P14635 433 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 PPARGP37231 505 aaPredicted RBP8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 GEMP55040 296 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 MAP3K7CLP57077 242 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 PLOD1Q02809 727 aaPredicted RBP8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 CDH17Q12864 832 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 LAMB3Q13751 1172 aa8.4□□□□□ -1.06
PRKAB1-207ENST00000542698 TXNRD3NBQ6F5E7 133 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms