RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SH3GLB1Q9Y371 365 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 TTLL3Q9Y4R7 772 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PCDHGA9Q9Y5G4 932 aaKnown RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PCDHGA8Q9Y5G5 932 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PCDHGA7Q9Y5G6 932 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PCDHGA6Q9Y5G7 932 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 USP16Q9Y5T5 823 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SNX14Q9Y5W7 946 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 BZW2Q9Y6E2 419 aaKnown RBP6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SPEF2Q9C093 1822 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 USP6P35125 1406 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 NCAPD2Q15021 1401 aa6.24□□□□□ -1.41
XRCC4-206ENST00000542685 SIPA1L3O60292 1781 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 PIK3C2AO00443 1686 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 CAMTA1Q9Y6Y1 1673 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 FLT4P35916 1363 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 UBR1Q8IWV7 1749 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 FRMD3A2A2Y4 597 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 C5orf60A6NFR6 353 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 HTRA2O43464 458 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 CYTH3O43739 400 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 USO1O60763 962 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 PFKFB2O60825 505 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 MTRF1O75570 445 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 MBD4O95243 580 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 IGLV2-14P01704 120 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 EIF2S1P05198 315 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 PDHBP11177 359 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 XBP1P17861 261 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 TNFRSF8P28908 595 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 GUCY2FP51841 1108 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 ARPC4P59998 168 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 VSNL1P62760 191 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 KIF23Q02241 960 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 KRTAP1-1Q07627 177 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 MYO1EQ12965 1108 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 EIF2B5Q13144 721 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 CBX3Q13185 183 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF268Q14587 947 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 C3orf36Q3SXR2 165 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 GLE1Q53GS7 698 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 SP5Q6BEB4 398 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 THOC7Q6I9Y2 204 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 NAA16Q6N069 864 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 NCCRP1Q6ZVX7 275 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 RUFY3Q7L099 469 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 DHX40Q8IX18 779 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 PDILTQ8N807 584 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 NSUN7Q8NE18 718 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC12Q8WUD4 166 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 IFT81Q8WYA0 676 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 DHX58Q96C10 678 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 CLPTM1LQ96KA5 538 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 NUP58Q9BVL2 599 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 PACSIN1Q9BY11 444 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 UPF3BQ9BZI7 483 aaKnown RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC8Q9H0W5 538 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-206ENST00000542685 HELLSQ9NRZ9 838 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 HYPKQ9NX55 129 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 MIS18AQ9NYP9 233 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 IPPQ9Y573 584 aa6.23□□□□□ -1.41
XRCC4-206ENST00000542685 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CTAGE9A4FU28 777 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC154A6NI56 674 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 BTBD19C9JJ37 291 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 YY2O15391 372 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 ANP32DO95626 131 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CD1AP06126 327 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 RPSAP08865 295 aaKnown RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 HMOX1P09601 288 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 KCNA2P16389 499 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 EDNRBP24530 442 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 LMO1P25800 156 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CACNA2D1P54289 1103 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 AK2P54819 239 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 ELF3P78545 371 aaPredicted RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 FPGSQ05932 587 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 ITIH3Q06033 890 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF844Q08AG5 666 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 MTMR1Q13613 665 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 E2F5Q15329 346 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 PCBP2Q15366 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 PTGISQ16647 500 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CD300EQ496F6 205 aaPredicted RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 FLYWCH1Q4VC44 716 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 PARP10Q53GL7 1025 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 RNF187Q5TA31 235 aaPredicted RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 ARMC3Q5W041 872 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 EMBQ6PCB8 327 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 GADL1Q6ZQY3 521 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 NOL8Q76FK4 1167 aaKnown RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CLNKQ7Z7G1 428 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CD302Q8IX05 232 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 SYCP3Q8IZU3 236 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 IL17RDQ8NFM7 739 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 KAT5Q92993 513 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 MTMR8Q96EF0 704 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 KLHL32Q96NJ5 620 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 HEPHQ9BQS7 1158 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms