RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.99□□□□□ -1.61
MDM2-228ENST00000542502 PARP14Q460N5 1801 aa4.99□□□□□ -1.61
MDM2-228ENST00000542502 A0A0G2JMZ2 1700 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 RLFQ13129 1914 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 A0A1W2PS29 197 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 TCRBV7S2A1N4TA0A589 114 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 SMIM22K7EJ46 135 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 TNPO2O14787 897 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 PRPF3O43395 683 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 PROM1O43490 865 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 PFKFB2O60825 505 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 HOXC6P09630 235 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 HSPA1AP0DMV8 641 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 HSPA1BP0DMV9 641 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 MYBL2P10244 700 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 CALML3P27482 149 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 GNA11P29992 359 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 PDIA3P30101 505 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 RGS2P41220 211 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 GRIA3P42263 894 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 PSMC4P43686 418 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 MAPK10P53779 464 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 SLC5A3P53794 718 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 SCAND1P57086 179 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 SRSF2Q01130 221 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 BECN1Q14457 450 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 PLS1Q14651 629 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 LRRC41Q15345 812 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 PTPN21Q16825 1174 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 SHROOM1Q2M3G4 852 aaPredicted RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 SNRNP48Q6IEG0 339 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 XRRA1Q6P2D8 792 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 TMTC3Q6ZXV5 915 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 CHST3Q7LGC8 479 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 MICU3Q86XE3 530 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 ADGRF4Q8IZF3 695 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 ANKRD13CQ8N6S4 541 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 C1orf162Q8NEQ5 155 aaPredicted RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 CCDC148Q8NFR7 591 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 TBC1D15Q8TC07 691 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 CCHCR1Q8TD31 782 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 CUL5Q93034 780 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 PAGR1Q9BTK6 254 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 UPF3BQ9BZI7 483 aaKnown RBP4.98□□□□□ -1.61
MDM2-228ENST00000542502 SLC13A1Q9BZW2 595 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 ACAD9Q9H845 621 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 AASDHPPTQ9NRN7 309 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 TCEAL9Q9UHQ7 104 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 NRBP1Q9UHY1 535 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 CCPG1Q9ULG6 757 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 MGAMO43451 1857 aa4.98□□□□□ -1.61
MDM2-228ENST00000542502 ADGRA2Q96PE1 1338 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 ASB14A6NK59 587 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 FAM171A2A8MVW0 826 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 TSPAN6O43657 245 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 STAM2O75886 525 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 ABLIM3O94929 683 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 DEXIO95424 95 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 AMY1AP04745 511 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 PDCP20941 246 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 GPR3P46089 330 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 AK2P54819 239 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 SOX10P56693 466 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 PIN1Q13526 163 aaPredicted RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 TRIM29Q14134 588 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 PCBP2Q15366 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
MDM2-228ENST00000542502 CDC37Q16543 378 aaPredicted RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 CTU1Q7Z7A3 348 aaKnown RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 PEG10Q86TG7 708 aaKnown RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 DPP9Q86TI2 863 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 CPXCR1Q8N123 301 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 RAET1EQ8TD07 263 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 HASPINQ8TF76 798 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 DPF1Q92782 380 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 GTF3C6Q969F1 213 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 SNX21Q969T3 373 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 FBXL20Q96IG2 436 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 FAXDC2Q96IV6 333 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 IWS1Q96ST2 819 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 NUP88Q99567 741 aaPredicted RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 MOV10L1Q9BXT6 1211 aaKnown RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 CDH19Q9H159 772 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 JMJD4Q9H9V9 463 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 INTS13Q9NVM9 706 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 ZIM2Q9NZV7 527 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 CPA4Q9UI42 421 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 PCDHA1Q9Y5I3 950 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 ZNFX1Q9P2E3 1918 aaKnown RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 COL11A1P12107 1806 aaPredicted RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 ZNF236Q9UL36 1845 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 FRMPD2Q68DX3 1309 aaPredicted RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 STK36Q9NRP7 1315 aa4.97□□□□□ -1.61
MDM2-228ENST00000542502 BAZ2BQ9UIF8 2168 aaKnown RBP4.97□□□□□ -1.61
MDM2-228ENST00000542502 PRAMEF33A0A0G2JMD5 474 aa4.96□□□□□ -1.62
MDM2-228ENST00000542502 E2F8A0AVK6 867 aa4.96□□□□□ -1.62
MDM2-228ENST00000542502 ESYT2A0FGR8 921 aa4.96□□□□□ -1.62
MDM2-228ENST00000542502 GCOM1H8Y6P7 765 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms