RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 NRDE2Q9H7Z3 1164 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 UGT1A7Q9HAW7 530 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 UGT1A10Q9HAW8 530 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 UGT1A8Q9HAW9 530 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 XAB2Q9HCS7 855 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 TXNRD2Q9NNW7 524 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 GPATCH2LQ9NWQ4 482 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 MTMR10Q9NXD2 777 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 DPP3Q9NY33 737 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 STX18Q9P2W9 335 aaKnown RBP5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 RBPJLQ9UBG7 517 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 STOML1Q9UBI4 398 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 HESX1Q9UBX0 185 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 PLA2G4CQ9UP65 541 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 DERAQ9Y315 318 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 NME7Q9Y5B8 376 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 PCDHA11Q9Y5I1 949 aa5.37□□□□□ -1.55
ATPAF1-212ENST00000542495 RALGAPA2Q2PPJ7 1873 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 C2orf71A6NGG8 1288 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 I3L4J1 428 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CXCL11O14625 94 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 NVLO15381 856 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 TLL1O43897 1013 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 GRAP2O75791 330 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 DGKIO75912 1065 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 APRTP07741 180 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 LINGO3P0C6S8 592 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 TXNP10599 105 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 MLNP12872 115 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 ZFXP17010 805 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CYP2F1P24903 491 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CNTFP26441 200 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 SDC4P31431 198 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 VHLP40337 213 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 GRM5P41594 1212 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 MRPS35P82673 323 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 GBE1Q04446 702 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC34A1Q06495 639 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 WASHC5Q12768 1159 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 GRIK3Q13003 919 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 USP4Q13107 963 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 TUBB3Q13509 450 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 TTLL4Q14679 1199 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 LBRQ14739 615 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 KPNB1Q14974 876 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 RCN1Q15293 331 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CHI3L2Q15782 390 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 TBCCQ15814 346 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 ZBTB6Q15916 424 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CDO1Q16878 200 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 NBPF20Q3BBV1 942 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 SYCP2LQ5T4T6 812 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 PPP1R26Q5T8A7 1209 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 FAXCQ5TGI0 409 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CAPRIN2Q6IMN6 1127 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 TRMT10BQ6PF06 316 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 KYAT3Q6YP21 454 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 MARK2Q7KZI7 788 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 SLC26A9Q7LBE3 791 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 APBB1IPQ7Z5R6 666 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 ALYREFQ86V81 257 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 TMPRSS6Q8IU80 811 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 APLFQ8IW19 511 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CTAGE3PQ8IX95 158 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 ADGRF2Q8IZF7 708 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 VPS52Q8N1B4 723 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 MPP5Q8N3R9 675 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 C12orf29Q8N999 325 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 ACMSDQ8TDX5 336 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 WDR60Q8WVS4 1066 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 NRG4Q8WWG1 115 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 FOXJ1Q92949 421 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 WNT2BQ93097 391 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 EMID1Q96A84 441 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CPB2Q96IY4 423 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 ACAP3Q96P50 834 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 OLFM3Q96PB7 478 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 MRPL45Q9BRJ2 306 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 SIKE1Q9BRV8 207 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 MECRQ9BV79 373 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 CCDC106Q9BWC9 280 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 GCOM2Q9BZD3 368 aaPredicted RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 C20orf27Q9GZN8 174 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 IQCGQ9H095 443 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 WWP1Q9H0M0 922 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 PLEKHA5Q9HAU0 1116 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 PRDM16Q9HAZ2 1276 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 NGRNQ9NPE2 291 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 EIF2B3Q9NR50 452 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 NMRK1Q9NWW6 199 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 ZFATQ9P243 1243 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 SORCS3Q9UPU3 1222 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 KCNH4Q9UQ05 1017 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 HBS1LQ9Y450 684 aaKnown RBP5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 PCDHB11Q9Y5F2 797 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 HEY1Q9Y5J3 304 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 USP3Q9Y6I4 520 aa5.36□□□□□ -1.55
ATPAF1-212ENST00000542495 EVPLQ92817 2033 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 SDR42E2A6NKP2 422 aa5.35□□□□□ -1.55
ATPAF1-212ENST00000542495 HACD1B0YJ81 288 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms