RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 GBP4Q96PP9 640 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 CPXM1Q96SM3 734 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 IRX2Q9BZI1 471 aaPredicted RBP17.06■□□□□ 0.32
CCND1-205ENST00000542367 LHX5Q9H2C1 402 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 POPDC2Q9HBU9 364 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 ABCB8Q9NUT2 735 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 CYP8B1Q9UNU6 501 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 LAMA1P25391 3075 aa17.06■□□□□ 0.32
CCND1-205ENST00000542367 IGHV1OR15-9A0A0B4J2B8 117 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 KRT9P35527 623 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 RPL6Q02878 288 aaKnown RBP17.05■□□□□ 0.32
CCND1-205ENST00000542367 NNTQ13423 1086 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 TAF5Q15542 800 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 MPP7Q5T2T1 576 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 RNF43Q68DV7 783 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 SMYD5Q6GMV2 418 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 KIAA1324Q6UXG2 1013 aaKnown RBP17.05■□□□□ 0.32
CCND1-205ENST00000542367 CHST9Q7L1S5 443 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 KIAA0907Q7Z7F0 614 aaPredicted RBP17.05■□□□□ 0.32
CCND1-205ENST00000542367 SLC47A2Q86VL8 602 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 WFDC5Q8TCV5 224 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 WFIKKN2Q8TEU8 576 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 DDX50Q9BQ39 737 aaKnown RBP17.05■□□□□ 0.32
CCND1-205ENST00000542367 CD93Q9NPY3 652 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 TMEM74BQ9NUR3 256 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 STIM2Q9P246 746 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 GGA2Q9UJY4 613 aa17.05■□□□□ 0.32
CCND1-205ENST00000542367 AP5Z1O43299 807 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 SYNCRIPO60506 623 aaKnown RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 TRUB2O95900 331 aaKnown RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 MOCS2O96007 188 aaPredicted RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 PABPC1P11940 636 aaKnown RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 PRKCHP24723 683 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 IRX4P78413 519 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 RAPGEF1Q13905 1077 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 ZC3H12AQ5D1E8 599 aaKnown RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 KLHDC7AQ5VTJ3 777 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 LYSMD4Q5XG99 296 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 SERPINA13PQ6UXR4 307 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 ADIPOR2Q86V24 386 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 SYT12Q8IV01 421 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 FAM71AQ8IYT1 594 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCND1-205ENST00000542367 ENOX1Q8TC92 643 aaKnown RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 CYB5D2Q8WUJ1 264 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 MYEOVQ96EZ4 313 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 NOX5Q96PH1 765 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 EDEM2Q9BV94 578 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 MKRN2Q9H000 416 aaKnown RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 NUCKS1Q9H1E3 243 aaKnown RBP17.04■□□□□ 0.32
CCND1-205ENST00000542367 PRDM16Q9HAZ2 1276 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 NFE2L3Q9Y4A8 694 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 CACNA1AO00555 2505 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 GON4LQ3T8J9 2241 aa17.04■□□□□ 0.32
CCND1-205ENST00000542367 LNP1A1A4G5 178 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 TM4SF5O14894 197 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 IGLV3-25P01717 112 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 EPHX1P07099 455 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 ITPKAP23677 461 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 EEF1GP26641 437 aaKnown RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 CD70P32970 193 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 BPIFB4P59827 614 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 RPS24P62847 133 aaKnown RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 PITX1P78337 314 aaPredicted RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 DRAP1Q14919 205 aaPredicted RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 DCAF6Q58WW2 860 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 MS4A13Q5J8X5 152 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 EFHC1Q5JVL4 640 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 MBLAC2Q68D91 279 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 OR6B2Q6IFH4 312 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 RBM43Q6ZSC3 357 aaKnown RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 TMPRSS6Q8IU80 811 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 DEFB106AQ8N104 65 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 AHI1Q8N157 1196 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 HJURPQ8NCD3 748 aaPredicted RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 C1orf131Q8NDD1 294 aaKnown RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 PRICKLE1Q96MT3 831 aaPredicted RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 PLCB1Q9NQ66 1216 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 TAB2Q9NYJ8 693 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 XPO7Q9UIA9 1087 aaKnown RBP17.03■□□□□ 0.32
CCND1-205ENST00000542367 PILRBQ9UKJ0 227 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 PLA2G4CQ9UP65 541 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 FHOD1Q9Y613 1164 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 CEP192Q8TEP8 1941 aa17.03■□□□□ 0.32
CCND1-205ENST00000542367 ATXN2Q99700 1313 aaKnown RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 C4orf47A7E2U8 309 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 NDUFS2O75306 463 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 GRAP2O75791 330 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 APOEP02649 317 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 GLI1P08151 1106 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 HLA-EP13747 358 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 ZNF33AQ06730 810 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 EIF4EBP2Q13542 120 aaPredicted RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 FNDC3BQ53EP0 1204 aaKnown RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 TRIM61Q5EBN2 209 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 PPM1JQ5JR12 505 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 C11orf57Q6ZUT1 292 aaPredicted RBP17.02■□□□□ 0.32
CCND1-205ENST00000542367 FAM183BPQ6ZVS7 135 aa17.02■□□□□ 0.32
CCND1-205ENST00000542367 METTL3Q86U44 580 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms