RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 CCR1P32246 355 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 SGSHP51688 502 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 RNASE9P60153 205 aaKnown RBP20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 FANCCQ00597 558 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 MTA1Q13330 715 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 C2CD6Q53TS8 623 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 EGFLAMQ63HQ2 1017 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 ARCQ7LC44 396 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 RASSF3Q86WH2 238 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 HJURPQ8NCD3 748 aaPredicted RBP20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 BAP1Q92560 729 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 NT5C3BQ969T7 300 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 PCDHB18PQ96TA0 734 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 NPY6RQ99463 290 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 AGPAT1Q99943 283 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 POLMQ9NP87 494 aaPredicted RBP20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 ZDHHC4Q9NPG8 344 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 STAP1Q9ULZ2 295 aa20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 SMG5Q9UPR3 1016 aaKnown RBP20.83■□□□□ 0.93
CACNA2D4-215ENST00000542340 M0QYT0 321 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 NPC1O15118 1278 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 TIMM44O43615 452 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 TBL1XO60907 577 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 ALDH1A2O94788 518 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 ABCB4P21439 1286 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 SIM2Q14190 667 aaPredicted RBP20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 EIF4HQ15056 248 aaKnown RBP20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 E2F5Q15329 346 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 MS4A13Q5J8X5 152 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 SDE2Q6IQ49 451 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 MMS22LQ6ZRQ5 1243 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 IRF2BP2Q7Z5L9 587 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 CHPFQ8IZ52 775 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 ZNF557Q8N988 423 aaPredicted RBP20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 SLC30A5Q8TAD4 765 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 UCMAQ8WVF2 138 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 GAB3Q8WWW8 586 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 RNF34Q969K3 372 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 PGAP3Q96FM1 320 aaPredicted RBP20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 EDEM3Q9BZQ6 932 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 NUCKS1Q9H1E3 243 aaKnown RBP20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 XPO7Q9UIA9 1087 aaKnown RBP20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 TMEM59LQ9UK28 342 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 RAB23Q9ULC3 237 aa20.82■□□□□ 0.92
CACNA2D4-215ENST00000542340 MYO18AQ92614 2054 aaKnown RBP20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 SYNJ2BP-COX16A0A087WUM0 186 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 FAM170AA1A519 330 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 TYW5A2RUC4 315 aaKnown RBP20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 GOLGA8SH3BPF8 625 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 F9P00740 461 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 HLA-FP30511 346 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 NSFP46459 744 aaKnown RBP20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 UBASH3AP57075 661 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 CENPCQ03188 943 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 NME3Q13232 169 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 SRSF5Q13243 272 aaKnown RBP20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 CLEC16AQ2KHT3 1053 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 SLC25A52Q3SY17 297 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 WFIKKN2Q8TEU8 576 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 RUBCNQ92622 972 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 PRICKLE1Q96MT3 831 aaPredicted RBP20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 ACOX2Q99424 681 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 GABRG3Q99928 467 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 ELOVL2Q9NXB9 296 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 COX16Q9P0S2 106 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 FAM186AA6NE01 2351 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 GPR179Q6PRD1 2367 aa20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 PTPRZ1P23471 2315 aaPredicted RBP20.81■□□□□ 0.92
CACNA2D4-215ENST00000542340 RPP40O75818 363 aaKnown RBP20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 HOXB2P14652 356 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 TACR2P21452 398 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 RPS24P62847 133 aaKnown RBP20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 FIGNQ5HY92 759 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 OTUD1Q5VV17 481 aaPredicted RBP20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 RAP1GAP2Q684P5 730 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 ANO7Q6IWH7 933 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 KIAA0907Q7Z7F0 614 aaPredicted RBP20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 CHSY1Q86X52 802 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 PHF13Q86YI8 300 aaPredicted RBP20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 MYEOVQ96EZ4 313 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 C11orf70Q9BRQ4 267 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 TTYH3Q9C0H2 523 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 ABCB8Q9NUT2 735 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 STIM2Q9P246 746 aa20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 THAP10Q9P2Z0 257 aaPredicted RBP20.8■□□□□ 0.92
CACNA2D4-215ENST00000542340 OTOGLQ3ZCN5 2332 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 EP300Q09472 2414 aaPredicted RBP20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 A0A1W2PQF6 199 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 LRRC53A6NM62 1247 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 FLT3P36888 993 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 WASP42768 502 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 CXCR3P49682 368 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 SULT1E1P49888 294 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 PTP4A2Q12974 167 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 TMEM215Q68D42 235 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 PRR23BQ6ZRT6 265 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 CEP68Q76N32 757 aa20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 SND1Q7KZF4 910 aaKnown RBP eCLIP20.79■□□□□ 0.92
CACNA2D4-215ENST00000542340 MFN1Q8IWA4 741 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms