RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 PRPF4O43172 522 aaKnown RBP eCLIP11.29□□□□□ -0.68e-7■■■■□ 19.8
ERBB2-204ENST00000541774 TMCC2O75069 709 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 PRKD3O94806 890 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 SERPINE1P05121 402 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 PRKCBP05771 671 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 FCGR1AP12314 374 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 CLK3P49761 638 aaKnown RBP11.29□□□□□ -0.6
ERBB2-204ENST00000541774 AGKQ53H12 422 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 XKR9Q5GH70 373 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 MTX3Q5HYI7 312 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 TWF2Q6IBS0 349 aaKnown RBP11.29□□□□□ -0.6
ERBB2-204ENST00000541774 PDPRQ8NCN5 879 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 PANX3Q96QZ0 392 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 HIPK3Q9H422 1215 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 WDR70Q9NW82 654 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 UCKL1Q9NWZ5 548 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 SHOC2Q9UQ13 582 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 ST14Q9Y5Y6 855 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
ERBB2-204ENST00000541774 LDLRP01130 860 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 ITGAXP20702 1163 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 ENDOUP21128 410 aaKnown RBP11.29□□□□□ -0.6
ERBB2-204ENST00000541774 CRKP46108 304 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 ACTR2P61160 394 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 ZBED5Q49AG3 693 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 MCFD2Q8NI22 146 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 SLC20A1Q8WUM9 679 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 VPS33AQ96AX1 596 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 HAPLN3Q96S86 360 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 ZSCAN5AQ9BUG6 496 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 PARVAQ9NVD7 372 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 MRPL39Q9NYK5 338 aaKnown RBP11.29□□□□□ -0.6
ERBB2-204ENST00000541774 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
ERBB2-204ENST00000541774 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 BTNL10A8MVZ5 291 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 MYBP10242 640 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 DBTP11182 482 aaKnown RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 CCNCP24863 283 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 DENND5AQ6IQ26 1287 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 CYP2U1Q7Z449 544 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ACSF2Q96CM8 615 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ZHX1-C8orf76Q96EF9 292 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 PCDHA3Q9Y5H8 950 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ABHD2P08910 425 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 MYCLP12524 364 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 PUDPQ08623 228 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 CCDC142Q17RM4 750 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 C2CD6Q53TS8 623 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 AMER2Q8N7J2 671 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 RDM1Q8NG50 284 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 BORCS6Q96GS4 357 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 MECRQ9BV79 373 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 KCNQ5Q9NR82 932 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 GAS2O43903 313 aaKnown RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ZSCAN5DPP0CG00 497 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ATP6V1B2P21281 511 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 STAT3P40763 770 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ELK3P41970 407 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 NKX2-5P52952 324 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 PLCL1Q15111 1095 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 GLRA4Q5JXX5 417 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 N4BP2L1Q5TBK1 243 aaPredicted RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 SULT1C3Q6IMI6 304 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 AMIGO3Q86WK7 504 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ASCC1Q8N9N2 400 aaKnown RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 MINDY2Q8NBR6 621 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 VPS39Q96JC1 886 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 KANSL1LA0AUZ9 987 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 PRR23AA6NEV1 266 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 MYO1GB0I1T2 1018 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 HSMCR30P0CW71 290 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 PABPC1P11940 636 aaKnown RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 STIP1P31948 543 aaKnown RBP11.28□□□□□ -0.6
ERBB2-204ENST00000541774 GRIA3P42263 894 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 PHKA2P46019 1235 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 CASP4P49662 377 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 ATAD3BQ5T9A4 648 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 HGSNATQ68CP4 663 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 TMEM26Q6ZUK4 368 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 OR8H1Q8NGG4 311 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 SPATA18Q8TC71 538 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 RNF34Q969K3 372 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
ERBB2-204ENST00000541774 NLRP4Q96MN2 994 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms