RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CLIC5Q9NZA1 410 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 SFMBT1Q9UHJ3 866 aa8.99□□□□□ -0.97
THBS3-210ENST00000541576 H3BRJ5 948 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 MCF2LO15068 1137 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 LILRB3O75022 631 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 GOT1P17174 413 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 TGM2P21980 687 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 IVDP26440 423 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 ELF1P32519 619 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 CTNNB1P35222 781 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 ALDH1A3P47895 512 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 OASLQ15646 514 aaKnown RBP8.98□□□□□ -0.97
THBS3-210ENST00000541576 EMBQ6PCB8 327 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 ZDHHC24Q6UX98 284 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 PLD5Q8N7P1 536 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 EIF1ADQ8N9N8 165 aaKnown RBP8.98□□□□□ -0.97
THBS3-210ENST00000541576 SERPINB11Q96P15 392 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 TTLL2Q9BWV7 592 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 RXFP1Q9HBX9 757 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 ZDHHC18Q9NUE0 388 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 DRG1Q9Y295 367 aaKnown RBP8.98□□□□□ -0.97
THBS3-210ENST00000541576 YIPF1Q9Y548 306 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 PRRG1O14668 218 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 TP73O15350 636 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 MSI1O43347 362 aaKnown RBP8.98□□□□□ -0.97
THBS3-210ENST00000541576 CREB3O43889 395 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 RARGP13631 454 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 ZFXP17010 805 aaPredicted RBP8.98□□□□□ -0.97
THBS3-210ENST00000541576 BMPR1AP36894 532 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 BIRC2Q13490 618 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 EIF4EBP2Q13542 120 aaPredicted RBP8.98□□□□□ -0.97
THBS3-210ENST00000541576 PTK6Q13882 451 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 MSANTD2Q6P1R3 559 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 B4GALNT4Q76KP1 1039 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 TMC7Q7Z402 723 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 CAVIN3Q969G5 261 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.98□□□□□ -0.97
THBS3-210ENST00000541576 ASIC3Q9UHC3 531 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 BAIAP2L1Q9UHR4 511 aa8.98□□□□□ -0.97
THBS3-210ENST00000541576 EEF2KO00418 725 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 ITGAVP06756 1048 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 ZSCAN5DPP0CG00 497 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 CSH1P0DML2 217 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 CSH2P0DML3 217 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 ETS1P14921 441 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 CCR1P32246 355 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 VPS41P49754 854 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 PLTPP55058 493 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 EIF3EP60228 445 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 NOMO1Q15155 1222 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 BRMS1LQ5PSV4 323 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 RASIP1Q5U651 963 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 C1orf228Q6PIY5 440 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 OR2W6PQ8NHA6 318 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 FBXO25Q8TCJ0 367 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.97□□□□□ -0.97
THBS3-210ENST00000541576 TMEM121Q9BTD3 319 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 RWDD3Q9Y3V2 267 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 HEY1Q9Y5J3 304 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 RANBP2P49792 3224 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 CXCL14O95715 111 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 CNPP09543 421 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 ZDHHC11BP0C7U3 371 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 AMPD1P23109 780 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 KLRC2P26717 231 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 EFEMP1Q12805 493 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 VEPH1Q14D04 833 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 TAF12Q16514 161 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 TTMPQ5BVD1 217 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 FAM182AQ5T1J6 154 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 TCEAL8Q8IYN2 117 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 ALLCQ8N6M5 410 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 CCDC89Q8N998 374 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 UBE2OQ9C0C9 1292 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 PRDM16Q9HAZ2 1276 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 ALG13Q9NP73 1137 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 ARHGEF4Q9NR80 690 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 OLA1Q9NTK5 396 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 HAUS2Q9NVX0 235 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 ARHGEF38Q9NXL2 777 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 MAFFQ9ULX9 164 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 MYO7AQ13402 2215 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 LINC01553A4QN01 128 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 SMIM23A6NLE4 172 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 FAM72CH0Y354 149 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 RBP3P10745 1247 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 SEMA3BQ13214 749 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 PPP2R5DQ14738 602 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 C10orf120Q5SQS8 335 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 FAM72AQ5TYM5 149 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 FAM72DQ6L9T8 149 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 RFX8Q6ZV50 586 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 FAM72BQ86X60 149 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 PDZD8Q8NEN9 1154 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 ZNF512Q96ME7 567 aaPredicted RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 TCF25Q9BQ70 676 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 TACO1Q9BSH4 297 aaKnown RBP8.97□□□□□ -0.97
THBS3-210ENST00000541576 ENTPD7Q9NQZ7 604 aa8.97□□□□□ -0.97
THBS3-210ENST00000541576 KLC4Q9NSK0 619 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms