RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 TBC1D30Q9Y2I9 924 aa9.84□□□□□ -0.83
CNOT4-212ENST00000541284 MEI4A8MW99 385 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 NOP56O00567 594 aaKnown RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 PROCP04070 461 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 C6orf222P0C671 652 aaPredicted RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 INHBEP58166 350 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 RBP5P82980 135 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 C11orf91Q3C1V1 193 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 FASTKD1Q53R41 847 aaKnown RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 PACS1Q6VY07 963 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 SLC26A9Q7LBE3 791 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 TRIM42Q8IWZ5 723 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 ISL2Q96A47 359 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 FAM161BQ96MY7 647 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 MCMBPQ9BTE3 642 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 YIPF3Q9GZM5 350 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 THAP1Q9NVV9 213 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 TPP1O14773 563 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 KRT38O76015 456 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 LGALS2P05162 132 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 FESP07332 822 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 SETSIPP0DME0 302 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 SDC4P31431 198 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 CSRP3P50461 194 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 ALDH18A1P54886 795 aaKnown RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 KDSRQ06136 332 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 RCN2Q14257 317 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 PPP6R3Q5H9R7 873 aaPredicted RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 TMCO4Q5TGY1 634 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 RNF220Q5VTB9 566 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 C4orf22Q6V702 233 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 LIMS2Q7Z4I7 341 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 SESTD1Q86VW0 696 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 NETO2Q8NC67 525 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 XPNPEP3Q9NQH7 507 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 TMPRSS4Q9NRS4 437 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 TUBGCP4Q9UGJ1 667 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 I3L4J1 428 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 USP1O94782 785 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 ATP5BP06576 529 aaKnown RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 CRABP2P29373 138 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 HOXA11P31270 313 aaPredicted RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 GRM5P41594 1212 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 SERPINB9P50453 376 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 RPL10AP62906 217 aaKnown RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 PITX1P78337 314 aaPredicted RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 STX3Q13277 289 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 STILQ15468 1287 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 TRMT5Q32P41 509 aaKnown RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 DENND5BQ6ZUT9 1274 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 TP53INP2Q8IXH6 220 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 LMNTD2Q8IXW0 634 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 PDCD7Q8N8D1 485 aaKnown RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 SMC1BQ8NDV3 1235 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 ZNF184Q99676 751 aaPredicted RBP9.83□□□□□ -0.84
CNOT4-212ENST00000541284 C16orf70Q9BSU1 422 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 GPAMQ9HCL2 828 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 DNAJB4Q9UDY4 337 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 AP4E1Q9UPM8 1137 aa9.83□□□□□ -0.84
CNOT4-212ENST00000541284 MYO18AQ92614 2054 aaKnown RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 MFSD11O43934 449 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 AMHP03971 560 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 TXNP10599 105 aaKnown RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 MLNP12872 115 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 P4HA1P13674 534 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 GOT1P17174 413 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 NR2C2P49116 596 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 IGBP1P78318 339 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 ADAM17P78536 824 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 CCNIQ14094 377 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 GREB1Q4ZG55 1949 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 ZNF484Q5JVG2 852 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 N4BP2L1Q5TBK1 243 aaPredicted RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 DPY19L2Q6NUT2 758 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 LRRC8BQ6P9F7 803 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 ALKAL1Q6UXT8 129 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 ACMSDQ8TDX5 336 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 LGMNQ99538 433 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 PIH1D1Q9NWS0 290 aaKnown RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 ERAP1Q9NZ08 941 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 DLGAP2Q9P1A6 1054 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 A0A0A0MRY4 1105 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 SLC25A27O95847 323 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 PIM1P11309 404 aaPredicted RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 OLIG2Q13516 323 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 HNRNPDQ14103 355 aaKnown RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 PPM1JQ5JR12 505 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 ADGRG6Q86SQ4 1221 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 CRLF3Q8IUI8 442 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 AZIN2Q96A70 460 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 C18orf25Q96B23 403 aaPredicted RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 SPATA13Q96N96 652 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 FCRL3Q96P31 734 aaPredicted RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 OXCT2Q9BYC2 517 aaPredicted RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 MIS12Q9H081 205 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 IQCGQ9H095 443 aaKnown RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 EIF2B3Q9NR50 452 aaKnown RBP9.82□□□□□ -0.84
CNOT4-212ENST00000541284 IL1RAPL1Q9NZN1 696 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 FZD10Q9ULW2 581 aa9.82□□□□□ -0.84
CNOT4-212ENST00000541284 DNAJC16Q9Y2G8 782 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms