RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 USP12O75317 370 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 ST6GAL1P15907 406 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 KLRK1P26718 216 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 NR4A2P43354 598 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 SOX2P48431 317 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 DMWDQ09019 674 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 TRABD2AQ86V40 505 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 OR4N4Q8N0Y3 316 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 ZNF48Q96MX3 618 aaPredicted RBP6.88□□□□□ -1.31
YBX3-210ENST00000540975 FCRL4Q96PJ5 515 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 SCNM1Q9BWG6 230 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 TP63Q9H3D4 680 aaPredicted RBP6.88□□□□□ -1.31
YBX3-210ENST00000540975 OBP2BQ9NPH6 170 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 AFG3L2Q9Y4W6 797 aa6.88□□□□□ -1.31
YBX3-210ENST00000540975 A0A087WV62 115 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 M0QYT0 321 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 NKX2-8O15522 239 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 ASNA1O43681 348 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 CNOT3O75175 753 aaKnown RBP6.87□□□□□ -1.31
YBX3-210ENST00000540975 KAT7O95251 611 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 PTK2BQ14289 1009 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 AAK1Q2M2I8 961 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 GLE1Q53GS7 698 aaKnown RBP6.87□□□□□ -1.31
YBX3-210ENST00000540975 LRCH2Q5VUJ6 765 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 PGBD2Q6P3X8 592 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 MRPL10Q7Z7H8 261 aaKnown RBP6.87□□□□□ -1.31
YBX3-210ENST00000540975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.87□□□□□ -1.31
YBX3-210ENST00000540975 STYXQ8WUJ0 223 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 GPR78Q96P69 363 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 TRIM2Q9C040 744 aa6.87□□□□□ -1.31
YBX3-210ENST00000540975 ABHD14A-ACY1A0A1B0GW23 586 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 RPP40O75818 363 aaKnown RBP6.86□□□□□ -1.31
YBX3-210ENST00000540975 RFPL3SP0C7P2 107 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 CYP19A1P11511 503 aaPredicted RBP6.86□□□□□ -1.31
YBX3-210ENST00000540975 PRF1P14222 555 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 SLC12A2P55011 1212 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 HNRNPA0Q13151 305 aaKnown RBP6.86□□□□□ -1.31
YBX3-210ENST00000540975 PFKFB4Q16877 469 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 WDR93Q6P2C0 686 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 FAM57BQ71RH2 274 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 ANKRD13BQ86YJ7 626 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 GATAD2AQ86YP4 633 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 RHPN2Q8IUC4 686 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 SRFBP1Q8NEF9 429 aaKnown RBP6.86□□□□□ -1.31
YBX3-210ENST00000540975 FAM71BQ8TC56 605 aa6.86□□□□□ -1.31
YBX3-210ENST00000540975 EMSYQ7Z589 1322 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 LGALS16A8MUM7 142 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 SGPL1O95470 568 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 PLCD1P51178 756 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 ANXA2RQ3ZCQ2 193 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 ANKRD40Q6AI12 368 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 KRTAP5-3Q6L8H2 238 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 DHRS13Q6UX07 377 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 PIP4P1Q86T03 277 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 RSC1A1Q92681 617 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 CCDC134Q9H6E4 229 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 PRDM16Q9HAZ2 1276 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 TMEM45AQ9NWC5 275 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 NFU1Q9UMS0 254 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 ZBTB1Q9Y2K1 713 aa6.85□□□□□ -1.31
YBX3-210ENST00000540975 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.85□□□□□ -1.31
YBX3-210ENST00000540975 TNFRSF6BO95407 300 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 AKR1A1P14550 325 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 TFEBP19484 476 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 AKT1P31749 480 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 RPL15P61313 204 aaKnown RBP6.84□□□□□ -1.31
YBX3-210ENST00000540975 TNFAIP2Q03169 654 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 LAMB3Q13751 1172 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 ZNF569Q5MCW4 686 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 ZNF474Q6S9Z5 364 aaPredicted RBP6.84□□□□□ -1.31
YBX3-210ENST00000540975 SLC39A5Q6ZMH5 540 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 ARL14EPQ8N8R7 260 aaPredicted RBP6.84□□□□□ -1.31
YBX3-210ENST00000540975 NRACQ8N912 160 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 OR1N1Q8NGS0 311 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 KAT2BQ92831 832 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 EID2BQ96D98 161 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 HMCESQ96FZ2 354 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 REXO5Q96IC2 774 aaKnown RBP6.84□□□□□ -1.31
YBX3-210ENST00000540975 MOV10Q9HCE1 1003 aaKnown RBP6.84□□□□□ -1.31
YBX3-210ENST00000540975 HEY2Q9UBP5 337 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 DAAM1Q9Y4D1 1078 aa6.84□□□□□ -1.31
YBX3-210ENST00000540975 KIF28PB7ZC32 967 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 SOCS2O14508 198 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 PPP6R2O75170 966 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 CYP3A4P08684 503 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 TMEM191BP0C7N4 346 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 PEPDP12955 493 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 SLC37A1P57057 533 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 FOXL2P58012 376 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 GALNT1Q10472 559 aaPredicted RBP6.83□□□□□ -1.32
YBX3-210ENST00000540975 BRD3Q15059 726 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 PUM3Q15397 648 aaKnown RBP6.83□□□□□ -1.32
YBX3-210ENST00000540975 TRIM60Q495X7 471 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 C1orf228Q6PIY5 440 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 Q8N9P0 234 aaPredicted RBP6.83□□□□□ -1.32
YBX3-210ENST00000540975 ZFYVE19Q96K21 471 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 CRB3Q9BUF7 120 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 ABHD14AQ9BUJ0 271 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 MECRQ9BV79 373 aa6.83□□□□□ -1.32
YBX3-210ENST00000540975 ERVK-5Q9HDB9 667 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms