RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 HDCP19113 662 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 KCNA4P22459 653 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 ASPAP45381 313 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 ST8SIA6P61647 398 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 FAAP100Q0VG06 881 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 MON1BQ7L1V2 547 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 LRRC8DQ7L1W4 858 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 NAT16Q8N8M0 369 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 LRRC57Q8N9N7 239 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 PHF21BQ96EK2 531 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 DUSP16Q9BY84 665 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 AGO3Q9H9G7 860 aaKnown RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 IL1RL2Q9HB29 575 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 STXBP5LQ9Y2K9 1186 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 FARP1Q9Y4F1 1045 aaPredicted RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 A0A1W2PQH9 124 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 H7C4K7 107 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 PHGDHO43175 533 aaKnown RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 TLR5O60602 858 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 IGFBP4P22692 258 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 NR1H3Q13133 447 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 POLD3Q15054 466 aaPredicted RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 TTMPQ5BVD1 217 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 TMCO4Q5TGY1 634 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 SYPL2Q5VXT5 272 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 PTRHD1Q6GMV3 140 aaKnown RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 TADA2BQ86TJ2 420 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 NT5DC4Q86YG4 428 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 PIWIL1Q96J94 861 aaKnown RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 FCRL2Q96LA5 508 aaPredicted RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 HAPLN2Q9GZV7 340 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 SDCBP2Q9H190 292 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 AAASQ9NRG9 546 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 FLRT1Q9NZU1 646 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 TKTP29401 623 aaKnown RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 SPRP35270 261 aaPredicted RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 PURAQ00577 322 aaKnown RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 CSHL1Q14406 222 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 MORF4L2Q15014 288 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 EFTUD2Q15029 972 aaKnown RBP eCLIP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 PDCD2Q16342 344 aaPredicted RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 ASTE1Q2TB18 679 aaPredicted RBP9.81□□□□□ -0.84
TTC39C-203ENST00000540918 FAM161BQ96MY7 647 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 DYRK4Q9NR20 520 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 GDF3Q9NR23 364 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 SIX4Q9UIU6 781 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 PTCH2Q9Y6C5 1203 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 MYH3P11055 1940 aa9.81□□□□□ -0.84
TTC39C-203ENST00000540918 LAMB4A4D0S4 1761 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 ERI2A8K979 691 aaKnown RBP9.8□□□□□ -0.84
TTC39C-203ENST00000540918 HOXA2O43364 376 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 TRIM16O95361 564 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 GJA1P17302 382 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 NFKB1P19838 968 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 BGNP21810 368 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SEMG2Q02383 582 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 CST9Q5W186 159 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SCARA3Q6AZY7 606 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 LRRC52Q8N7C0 313 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 TMA16Q96EY4 203 aaKnown RBP9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SNX27Q96L92 541 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 ECT2Q9H8V3 914 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 BPIFA1Q9NP55 256 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 ADA2Q9NZK5 511 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SRRDQ9UH36 339 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 MYH10P35580 1976 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 AKAP11Q9UKA4 1901 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SYNDIG1LA6NDD5 238 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SH3BGRLO75368 114 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 TOMM70O94826 608 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 RHOBTB1O94844 696 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SERPIND1P05546 499 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SLC2A3P11169 496 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 PTPN7P35236 360 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 MATKP42679 507 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 AFF1P51825 1210 aaKnown RBP9.8□□□□□ -0.84
TTC39C-203ENST00000540918 ANKRD20A2Q5SQ80 823 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 ANKRD20A1Q5TYW2 823 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 PLPP4Q5VZY2 271 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 LCLAT1Q6UWP7 414 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 LRIG3Q6UXM1 1119 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 HFE2Q6ZVN8 426 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 MAB21L3Q8N8X9 362 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 FBXO44Q9H4M3 255 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 PCDH18Q9HCL0 1135 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 XAB2Q9HCS7 855 aaKnown RBP9.8□□□□□ -0.84
TTC39C-203ENST00000540918 CREBZFQ9NS37 354 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 GMIPQ9P107 970 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 CDH9Q9ULB4 789 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 MYH1P12882 1939 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 CNMDO75829 334 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SUPT7LO94864 414 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 EDN1P05305 212 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 PBLDP30039 288 aaPredicted RBP9.8□□□□□ -0.84
TTC39C-203ENST00000540918 CTNNB1P35222 781 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 SMAD3P84022 425 aaKnown RBP9.8□□□□□ -0.84
TTC39C-203ENST00000540918 DDX39BQ13838 428 aaKnown RBP9.8□□□□□ -0.84
TTC39C-203ENST00000540918 PLEKHA7Q6IQ23 1121 aa9.8□□□□□ -0.84
TTC39C-203ENST00000540918 TCP10LQ8TDR4 215 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms