RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PAGE1O75459 146 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 TTC4O95801 387 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 SOD2P04179 222 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 LINC00271P0C7V0 271 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 ZFXP17010 805 aaPredicted RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 YWHAQP27348 245 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 STIP1P31948 543 aaKnown RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 MAGEA4P43358 317 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 IRAK1P51617 712 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 AIF1P55008 147 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 XRCC4Q13426 336 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 PRKD1Q15139 912 aaPredicted RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 MSANTD2Q6P1R3 559 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 MON1AQ86VX9 555 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 CDKL3Q8IVW4 592 aaPredicted RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 PPIL6Q8IXY8 311 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 FCRL2Q96LA5 508 aaPredicted RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 CENPHQ9H3R5 247 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 ADAM21Q9UKJ8 722 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 SHOC2Q9UQ13 582 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 BACE2Q9Y5Z0 518 aa12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.67□□□□□ -0.38
AP003559.1-201ENST00000540906 NUP205Q92621 2012 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 GOLGA6CA6NDK9 693 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 MOCS2O96007 188 aaPredicted RBP12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 GOLGA6DP0CG33 693 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 SLCO1A2P46721 670 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 NR2C2P49116 596 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 EFEMP1Q12805 493 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 SKIDA1Q1XH10 827 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 KRT71Q3SY84 523 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 TRMT10CQ7L0Y3 403 aaKnown RBP12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 ANKMY2Q8IV38 441 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 IGDCC3Q8IVU1 814 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 CMTR2Q8IYT2 770 aaKnown RBP12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 CELF6Q96J87 481 aaKnown RBP12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 SPATA17Q96L03 361 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 ATP6V1G3Q96LB4 118 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 CCSER2Q9H7U1 834 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 IL23AQ9NPF7 189 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 RAB6BQ9NRW1 208 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 NDFIP2Q9NV92 336 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 GOLGA6AQ9NYA3 693 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 HS3ST4Q9Y661 456 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 CLUHO75153 1309 aa12.66□□□□□ -0.38
AP003559.1-201ENST00000540906 AVILO75366 819 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 SRGAP2BP0DMP2 458 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 DNAJB2P25686 324 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 HCAR3P49019 387 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 DSG1Q02413 1049 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 WASHC5Q12768 1159 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 PDIA2Q13087 525 aaKnown RBP12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 TERF2Q15554 542 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 ARL13BQ3SXY8 428 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 PIK3R6Q5UE93 754 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 MANEALQ5VSG8 457 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 ARHGAP36Q6ZRI8 547 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 CAPN12Q6ZSI9 719 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 RELL1Q8IUW5 271 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 TMEM199Q8N511 208 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 TFB1MQ8WVM0 346 aaKnown RBP12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 BADQ92934 168 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 MYEOVQ96EZ4 313 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 P2RY11Q96G91 374 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 OSBPL2Q9H1P3 480 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 FBXO44Q9H4M3 255 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 CTNNAL1Q9UBT7 734 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 MAGED2Q9UNF1 606 aaPredicted RBP12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 SHROOM3Q8TF72 1996 aa12.65□□□□□ -0.38
AP003559.1-201ENST00000540906 TLDC2A0PJX2 215 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 CFAP69A5D8W1 941 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 GCATO75600 419 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 ABLIM3O94929 683 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 ZDHHC11BP0C7U3 371 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 EPHB2P29323 1055 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 GLUD2P49448 558 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 GPX6P59796 221 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 IFFO1Q0D2I5 559 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 AP1B1Q10567 949 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 LONRF1Q17RB8 773 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 BRMS1LQ5PSV4 323 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 ZNF534Q76KX8 674 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 HTR3CQ8WXA8 447 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 PAK5Q9P286 719 aa12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 BCCIPQ9P287 314 aaKnown RBP eCLIP12.65□□□□□ -0.39
AP003559.1-201ENST00000540906 NYNRINQ9P2P1 1898 aaKnown RBP12.64□□□□□ -0.39
AP003559.1-201ENST00000540906 C5orf60A6NFR6 353 aa12.64□□□□□ -0.39
AP003559.1-201ENST00000540906 ZBBXA8MT70 800 aa12.64□□□□□ -0.39
AP003559.1-201ENST00000540906 RNF103O00237 685 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms