RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CHMP2B	Q9UQN3	213 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PCDHB4	Q9Y5E5	795 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IGKV6-21	A0A0C4DH24	114 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ARHGAP42	A6NI28	874 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783		F8VP50	259 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF623	O75123	536 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	UNG	P13051	313 aa	Predicted RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CYP3A5	P20815	502 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CDK7	P50613	346 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	UBE3A	Q05086	875 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FAAP100	Q0VG06	881 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MAMLD1	Q13495	774 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LIN52	Q52LA3	116 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SCARA3	Q6AZY7	606 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CHRDL2	Q6WN34	429 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ARID3B	Q8IVW6	561 aa	Predicted RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SCUBE1	Q8IWY4	988 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TDH	Q8IZJ6	230 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CCDC110	Q8TBZ0	833 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SKA1	Q96BD8	255 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TIFA	Q96CG3	184 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CCDC124	Q96CT7	223 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	FERMT1	Q9BQL6	677 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	WDR83	Q9BRX9	315 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	STRA6	Q9BX79	667 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC13A1	Q9BZW2	595 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CYP3A43	Q9HB55	503 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMEM8A	Q9HCN3	771 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RHBDL2	Q9NX52	303 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NDE1	Q9NXR1	346 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KLK14	Q9P0G3	267 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZNF212	Q9UDV6	495 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KIAA1257	Q9ULG3	409 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IPP	Q9Y573	584 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ATAD5	Q96QE3	1844 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KIAA0100	Q14667	2235 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TYW5	A2RUC4	315 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CYB561D2	O14569	222 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CREB3	O43889	395 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TSPAN1	O60635	241 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PGM3	O95394	542 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC1A1	P43005	524 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MAGEA10	P43363	369 aa	Predicted RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	EPHB1	P54762	984 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DSG1	Q02413	1049 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CDC16	Q13042	620 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DYNC1I2	Q13409	638 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GPM6B	Q13491	265 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	UBAP2L	Q14157	1087 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SMTNL2	Q2TAL5	461 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CTXN3	Q4LDR2	81 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ZC3H12A	Q5D1E8	599 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	KCNT1	Q5JUK3	1230 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CYP4A22	Q5TCH4	519 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CDHR3	Q6ZTQ4	885 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RASSF3	Q86WH2	238 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TDRP	Q86YL5	185 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IGDCC3	Q8IVU1	814 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HERC6	Q8IVU3	1022 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	POU5F2	Q8N7G0	328 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	BANP	Q8N9N5	519 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC43A3	Q8NBI5	491 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RILP	Q96NA2	401 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	IFT122	Q9HBG6	1241 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	DMAP1	Q9NPF5	467 aa	Predicted RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	XPNPEP1	Q9NQW7	623 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RGS18	Q9NS28	235 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SENP1	Q9P0U3	644 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC7A8	Q9UHI5	535 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ANGPTL2	Q9UKU9	493 aa		5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MTO1	Q9Y2Z2	717 aa	Known RBP	5.85	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SMCHD1	A6NHR9	2005 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CCDC160	A6NGH7	325 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	OR6C75	A6NL08	312 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783		A8MXQ7	604 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HNRNPR	O43390	633 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CIB2	O75838	187 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	POMC	P01189	267 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	GRIA2	P42262	883 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	INHBC	P55103	352 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SLC25A3	Q00325	362 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MBTD1	Q05BQ5	628 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ENPEP	Q07075	957 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NCOA4	Q13772	614 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HSF5	Q4G112	596 aa	Predicted RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	TMEM270	Q6UE05	265 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	NUDT18	Q6ZVK8	323 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	PRPF39	Q86UA1	669 aa	Known RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	SATL1	Q86VE3	508 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	RELL1	Q8IUW5	271 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	APLF	Q8IW19	511 aa	Predicted RBP	5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	CTAGE3P	Q8IX95	158 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	C12orf56	Q8IXR9	622 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	ALLC	Q8N6M5	410 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HERVK_113	Q902F9	699 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	MTBP	Q96DY7	904 aa		5.84	□□□□□ -1.47
RAPGEF4-215	ENST00000540783	HPDL	Q96IR7	371 aa		5.84	□□□□□ -1.47

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