RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FKBP3Q00688 224 aaKnown RBP12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 BNC1Q01954 994 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 SCAPQ12770 1279 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 HLA-BQ31612 363 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 MSANTD2Q6P1R3 559 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 CHST9Q7L1S5 443 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 ADIPOR2Q86V24 386 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 ZC3H3Q8IXZ2 948 aaKnown RBP12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 SIX6OS1Q8N1H7 587 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 BAHD1Q8TBE0 780 aaPredicted RBP12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 EEF2KMTQ96G04 330 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 CDC6Q99741 560 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 TSG101Q99816 390 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 GOLPH3LQ9H4A5 285 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 IL21RQ9HBE5 538 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 SFMBT1Q9UHJ3 866 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 GGA2Q9UJY4 613 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 CACNA1GO43497 2377 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 ZZEF1O43149 2961 aa12.52□□□□□ -0.41
CBX3P4-202ENST00000540428 O00370 1275 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 TSPAN3O60637 253 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 ATP5BP06576 529 aaKnown RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 DLDP09622 509 aaKnown RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 PABPC1P11940 636 aaKnown RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 HLA-EP13747 358 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 CD19P15391 556 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 ACSL1P33121 698 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 GRIA4P48058 902 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 DAOAP59103 153 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 SUZ12Q15022 739 aaKnown RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 TEAD4Q15561 434 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 PTPRNQ16849 979 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 PKDCCQ504Y2 493 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 FNDC3BQ53EP0 1204 aaKnown RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 DCAF17Q5H9S7 520 aaPredicted RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 TCERG1LQ5VWI1 586 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 NUGGCQ68CJ6 796 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 SLCO6A1Q86UG4 719 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 UNC45BQ8IWX7 931 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 UBR7Q8N806 425 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 SETD7Q8WTS6 366 aaKnown RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 IRGQQ8WZA9 623 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 EDEM1Q92611 657 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 AZIN2Q96A70 460 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 GTPBP4Q9BZE4 634 aaKnown RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 C6orf106Q9H6K1 298 aaPredicted RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 ABCB8Q9NUT2 735 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 SUN2Q9UH99 717 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 SPEGQ15772 3267 aa12.51□□□□□ -0.41
CBX3P4-202ENST00000540428 CKAP5Q14008 2032 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 A0A1B0GVT2 93 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 IRAK2O43187 625 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 DKK1O94907 266 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 SEMA4FO95754 770 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 IGLV3-27P01718 113 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 DNTTP04053 509 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 PAEPP09466 180 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 PRCPP42785 496 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 SLC11A2P49281 568 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 RPS14P62263 151 aaKnown RBP12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 LRRC63Q05C16 580 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 TTC31Q49AM3 519 aaPredicted RBP12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 ZNF658Q5TYW1 1059 aaPredicted RBP12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 MBLAC2Q68D91 279 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 LCLAT1Q6UWP7 414 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 TMPRSS7Q7RTY8 843 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 FAM124AQ86V42 546 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 SMYD4Q8IYR2 804 aaPredicted RBP12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 PNPLA1Q8N8W4 532 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 UBA3Q8TBC4 463 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 RHBDD1Q8TEB9 315 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 CYB5D2Q8WUJ1 264 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 SNX19Q92543 992 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 SLC35C1Q96A29 364 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 GSDMAQ96QA5 445 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 CCDC86Q9H6F5 360 aaKnown RBP12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 SGK2Q9HBY8 427 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 PRSS16Q9NQE7 514 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 ARMCX3Q9UH62 379 aaPredicted RBP12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 SCML1Q9UN30 329 aa12.5□□□□□ -0.41
CBX3P4-202ENST00000540428 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 PMM2O15305 246 aa12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 MSI1O43347 362 aaKnown RBP12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 LCP1P13796 627 aa12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 POLR2EP19388 210 aaKnown RBP12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 CD27P26842 260 aa12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 CSNK1EP49674 416 aaKnown RBP12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 STILQ15468 1287 aa12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 KIF19Q2TAC6 998 aa12.49□□□□□ -0.41
CBX3P4-202ENST00000540428 ZNF776Q68DI1 518 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms