RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 KCNE4Q8WWG9 221 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 MED8Q96G25 268 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 TNIP3Q96KP6 325 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 NEUROG2Q9H2A3 272 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 SGK2Q9HBY8 427 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 GDF3Q9NR23 364 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 ABCB8Q9NUT2 735 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 STK17AQ9UEE5 414 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 IL17BQ9UHF5 180 aa8.37□□□□□ -1.07
LRP6-204ENST00000540415 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 CKAP5Q14008 2032 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 A0A1W2PNU3 283 aaPredicted RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 A0A1W2PP55 124 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 SLC12A8A0AV02 714 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 PMS2P1A4D2B8 440 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 C10orf142B7Z368 130 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 H3BQV1 296 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 KIAA0391O15091 583 aaKnown RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 MID1O15344 667 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 PHACTR2O75167 634 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 GJB2P29033 226 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 CHKAP35790 457 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 KIF11P52732 1056 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 PPP2CBP62714 309 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 PPP2CAP67775 309 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 VAC14Q08AM6 782 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 NFATC3Q12968 1075 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 BIRC3Q13489 604 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 ALCAMQ13740 583 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 TTC31Q49AM3 519 aaPredicted RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 ZNF667Q5HYK9 610 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 BROXQ5VW32 411 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 RRAGBQ5VZM2 374 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 ZNF776Q68DI1 518 aaPredicted RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 SPOPLQ6IQ16 392 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 NELFCDQ8IXH7 590 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 SYAP1Q96A49 352 aaPredicted RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 MYO19Q96H55 970 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 VCPIP1Q96JH7 1222 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 ZNF578Q96N58 590 aaPredicted RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 PABPC3Q9H361 631 aaKnown RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 ASCL3Q9NQ33 180 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 AGPAT3Q9NRZ7 376 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 FBXL12Q9NXK8 326 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 FBXO2Q9UK22 296 aaPredicted RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 CA5BQ9Y2D0 317 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 CLIC4Q9Y696 253 aa8.36□□□□□ -1.07
LRP6-204ENST00000540415 UTP20O75691 2785 aaKnown RBP8.36□□□□□ -1.07
LRP6-204ENST00000540415 PLXNA2O75051 1894 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 LRRIQ3A6PVS8 624 aaPredicted RBP8.35□□□□□ -1.07
LRP6-204ENST00000540415 TLR4O00206 839 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 SIN3BO75182 1162 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 USP12O75317 370 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 RNASEH2AO75792 299 aaKnown RBP8.35□□□□□ -1.07
LRP6-204ENST00000540415 KIF20AO95235 890 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 CYBBP04839 570 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 ACP1P24666 158 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 ATICP31939 592 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 CD70P32970 193 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 ARRB1P49407 418 aaPredicted RBP8.35□□□□□ -1.07
LRP6-204ENST00000540415 UCNP55089 124 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 ZBTB16Q05516 673 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 ILKQ13418 452 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 NCOA4Q13772 614 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 CDCP2Q5VXM1 449 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 MBLAC2Q68D91 279 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 TMC6Q7Z403 805 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 FAM217AQ8IXS0 508 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 CACTIN-AS1Q8N1I8 211 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 CRYBG2Q8N1P7 616 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 SLC25A45Q8N413 288 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 CPXM2Q8N436 756 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 SNRNP27Q8WVK2 155 aaKnown RBP8.35□□□□□ -1.07
LRP6-204ENST00000540415 NDRG1Q92597 394 aaKnown RBP8.35□□□□□ -1.07
LRP6-204ENST00000540415 SERAC1Q96JX3 654 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 SLC2A11Q9BYW1 496 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 RSPH9Q9H1X1 276 aaPredicted RBP8.35□□□□□ -1.07
LRP6-204ENST00000540415 VRTNQ9H8Y1 702 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 UCKL1Q9NWZ5 548 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 ADAMTS1Q9UHI8 967 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 GGA2Q9UJY4 613 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 PLA2G4CQ9UP65 541 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 ZNF510Q9Y2H8 683 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 KIF3AQ9Y496 699 aa8.35□□□□□ -1.07
LRP6-204ENST00000540415 A0A1B0GVM2 712 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 TERTO14746 1132 aaKnown RBP8.34□□□□□ -1.07
LRP6-204ENST00000540415 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
LRP6-204ENST00000540415 TIMM44O43615 452 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 OPA1O60313 960 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 CSO75390 466 aaKnown RBP8.34□□□□□ -1.07
LRP6-204ENST00000540415 C4BPAP04003 597 aaKnown RBP8.34□□□□□ -1.07
LRP6-204ENST00000540415 DLDP09622 509 aaKnown RBP8.34□□□□□ -1.07
LRP6-204ENST00000540415 PABPC1P11940 636 aaKnown RBP8.34□□□□□ -1.07
LRP6-204ENST00000540415 ASPAP45381 313 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 RXRGP48443 463 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 NUMBP49757 651 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 METAP1P53582 386 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 DLG4P78352 724 aa8.34□□□□□ -1.07
LRP6-204ENST00000540415 COG7P83436 770 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms