RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 COG4Q9H9E3 785 aa14.33□□□□□ -0.11
SCNN1A-215ENST00000540037 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.11
SCNN1A-215ENST00000540037 RHBDL2Q9NX52 303 aa14.33□□□□□ -0.11
SCNN1A-215ENST00000540037 MOCS1Q9NZB8 636 aa14.33□□□□□ -0.11
SCNN1A-215ENST00000540037 CLPTM1O96005 669 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 AMHP03971 560 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 PACS1Q6VY07 963 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 RTKN2Q8IZC4 609 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 LENG8Q96PV6 779 aaPredicted RBP14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 OR52B2Q96RD2 323 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 CNPY3Q9BT09 278 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 SORCS3Q9UPU3 1222 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 WNT10BO00744 389 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 ITGB3P05106 788 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 SERPINE1P05121 402 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 CCR10P46092 362 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 MTTPP55157 894 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 CNTN2Q02246 1040 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 MYLK3Q32MK0 819 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 ZNF667Q5HYK9 610 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 C6orf52Q5T4I8 152 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 OGFRL1Q5TC84 451 aaPredicted RBP14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 TRIM50Q86XT4 487 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 PLD6Q8N2A8 252 aaKnown RBP14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 C1orf127Q8N9H9 656 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 ZFP28Q8NHY6 868 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 DGCR14Q96DF8 476 aaKnown RBP14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 DTNBP1Q96EV8 351 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 MRPL4Q9BYD3 311 aaKnown RBP14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 TMEM134Q9H6X4 195 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 HEMK1Q9Y5R4 338 aaPredicted RBP14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 TRIP11Q15643 1979 aa14.33□□□□□ -0.12
SCNN1A-215ENST00000540037 FBXO21O94952 628 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 CRTAMO95727 393 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 PRKCBP05771 671 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 ERVK-10P10266 1014 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 PKNOX1P55347 436 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 GALNT4Q8N4A0 578 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 PPP4R1Q8TF05 950 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 CMTM5Q96DZ9 223 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 B3GNT5Q9BYG0 378 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 WDR55Q9H6Y2 383 aaPredicted RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 BCLAF3A2AJT9 711 aaKnown RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 SPDYE16A6NNV3 312 aaPredicted RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 NEMP1O14524 444 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 CASQ2O14958 399 aaPredicted RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 RALBP11234 206 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 ABCE1P61221 599 aaKnown RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 MYBPC1Q00872 1141 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 TMEM132BQ14DG7 1078 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 STILQ15468 1287 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 SCUBE3Q8IX30 993 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 PQLC1Q8N2U9 271 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 JADE3Q92613 823 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 USP13Q92995 863 aaPredicted RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 LENG1Q96BZ8 264 aaPredicted RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 TMEM176AQ96HP8 235 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 PRPF18Q99633 342 aaKnown RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 NRDE2Q9H7Z3 1164 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 COPS7BQ9H9Q2 264 aaPredicted RBP14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 COPG2Q9UBF2 871 aa14.32□□□□□ -0.12
SCNN1A-215ENST00000540037 STX16-NPEPL1H3BU86 382 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 TNNC2P02585 160 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MLH1P40692 756 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 NUDT2P50583 147 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 AP3M2P53677 418 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 CDKL1Q00532 357 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 KLF10Q13118 480 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MAP7Q14244 749 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 CNGA3Q16281 694 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 KCNT2Q6UVM3 1135 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 ZPBP2Q6X784 338 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 EEPD1Q7L9B9 569 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 SDCCAG8Q86SQ7 713 aaPredicted RBP14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 LILRA2Q8N149 483 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 ANKRD36BP1Q96IX9 119 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 PPP1R16BQ96T49 567 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MAGED2Q9UNF1 606 aaPredicted RBP14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 HES2Q9Y543 173 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 COL4A5P29400 1685 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 SIP14410 1827 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 FER1L6Q2WGJ9 1857 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 SMIM31A0A1B0GVY4 71 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 FAM200BP0CF97 657 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 XRCC1P18887 633 aaPredicted RBP14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 CYP2F1P24903 491 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MGAT1P26572 445 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 ABCD1P33897 745 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 THOP1P52888 689 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 DLG2Q15700 870 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 SLC9A4Q6AI14 798 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 TIFABQ6ZNK6 161 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MCUQ8NE86 351 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 TRAPPC12Q8WVT3 735 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 BCO2Q9BYV7 579 aa14.31□□□□□ -0.12
SCNN1A-215ENST00000540037 MIS12Q9H081 205 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms