RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 ITGA8P53708 1063 aa10□□□□□ -0.81
MDH1-215ENST00000539945 WDR5P61964 334 aaKnown RBP10□□□□□ -0.81
MDH1-215ENST00000539945 SEMA3BQ13214 749 aa10□□□□□ -0.81
MDH1-215ENST00000539945 XRCC4Q13426 336 aa10□□□□□ -0.81
MDH1-215ENST00000539945 SLMAPQ14BN4 828 aa10□□□□□ -0.81
MDH1-215ENST00000539945 UAP1Q16222 522 aaPredicted RBP10□□□□□ -0.81
MDH1-215ENST00000539945 DDR2Q16832 855 aa10□□□□□ -0.81
MDH1-215ENST00000539945 P3H1Q32P28 736 aa10□□□□□ -0.81
MDH1-215ENST00000539945 HSP90B2PQ58FF3 399 aa10□□□□□ -0.81
MDH1-215ENST00000539945 BTBD8Q5XKL5 378 aa10□□□□□ -0.81
MDH1-215ENST00000539945 SLC8B1Q6J4K2 584 aa10□□□□□ -0.81
MDH1-215ENST00000539945 HIBCHQ6NVY1 386 aaPredicted RBP10□□□□□ -0.81
MDH1-215ENST00000539945 C1orf228Q6PIY5 440 aa10□□□□□ -0.81
MDH1-215ENST00000539945 KCNT2Q6UVM3 1135 aa10□□□□□ -0.81
MDH1-215ENST00000539945 NPNTQ6UXI9 565 aa10□□□□□ -0.81
MDH1-215ENST00000539945 LRIG3Q6UXM1 1119 aa10□□□□□ -0.81
MDH1-215ENST00000539945 CMTR2Q8IYT2 770 aaKnown RBP10□□□□□ -0.81
MDH1-215ENST00000539945 PYROXD2Q8N2H3 581 aa10□□□□□ -0.81
MDH1-215ENST00000539945 ARHGAP18Q8N392 663 aa10□□□□□ -0.81
MDH1-215ENST00000539945 GLIS1Q8NBF1 620 aa10□□□□□ -0.81
MDH1-215ENST00000539945 ATAD1Q8NBU5 361 aa10□□□□□ -0.81
MDH1-215ENST00000539945 ADAM32Q8TC27 787 aa10□□□□□ -0.81
MDH1-215ENST00000539945 DQX1Q8TE96 717 aaKnown RBP10□□□□□ -0.81
MDH1-215ENST00000539945 RNF139Q8WU17 664 aa10□□□□□ -0.81
MDH1-215ENST00000539945 RSAD2Q8WXG1 361 aa10□□□□□ -0.81
MDH1-215ENST00000539945 ITPKCQ96DU7 683 aa10□□□□□ -0.81
MDH1-215ENST00000539945 SPATA17Q96L03 361 aa10□□□□□ -0.81
MDH1-215ENST00000539945 CEP295NLQ96MC4 621 aa10□□□□□ -0.81
MDH1-215ENST00000539945 PGLYRP2Q96PD5 576 aa10□□□□□ -0.81
MDH1-215ENST00000539945 VN1R3Q9BXE9 311 aa10□□□□□ -0.81
MDH1-215ENST00000539945 ADAM7Q9H2U9 754 aa10□□□□□ -0.81
MDH1-215ENST00000539945 SMOC2Q9H3U7 446 aa10□□□□□ -0.81
MDH1-215ENST00000539945 IL23AQ9NPF7 189 aa10□□□□□ -0.81
MDH1-215ENST00000539945 COX16Q9P0S2 106 aa10□□□□□ -0.81
MDH1-215ENST00000539945 PLXNA3P51805 1871 aa10□□□□□ -0.81
MDH1-215ENST00000539945 BCLAF3A2AJT9 711 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 CFAP69A5D8W1 941 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 H3BQF6 201 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 DNALI1O14645 258 aaPredicted RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 OPA1O60313 960 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 RTN3O95197 1032 aaPredicted RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 IFNB1P01574 187 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 SOD2P04179 222 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 HSPA1AP0DMV8 641 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 HSPA1BP0DMV9 641 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 RARGP13631 454 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ETS1P14921 441 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 GOT1P17174 413 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 OAS2P29728 719 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 VPS41P49754 854 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ARPP19P56211 112 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 RPL10AP62906 217 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 DEFB103AP81534 67 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ROR1Q01973 937 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 GPS1Q13098 491 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.99□□□□□ -0.812e-7■■□□□ 13.4
MDH1-215ENST00000539945 IZUMO3Q5VZ72 239 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 DARS2Q6PI48 645 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 PRSS55Q6UWB4 352 aaPredicted RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 CEP128Q6ZU80 1094 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 RFX8Q6ZV50 586 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 BZW1Q7L1Q6 419 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 UBE2Q1Q7Z7E8 422 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 PRUNE1Q86TP1 453 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 TAC4Q86UU9 113 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ZC3H18Q86VM9 953 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 UNC45BQ8IWX7 931 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 SLC39A11Q8N1S5 342 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 TTC9BQ8N6N2 239 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 RIN2Q8WYP3 895 aaPredicted RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 RTP4Q96DX8 246 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 PKNOX2Q96KN3 472 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ZNF558Q96NG5 402 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 CNTNAP3BQ96NU0 1288 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ZIM3Q96PE6 472 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 SH3GL2Q99962 352 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 CNTNAP3Q9BZ76 1288 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 PABPC3Q9H361 631 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 WDCPQ9H6R7 721 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 NMUR1Q9HB89 426 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ANLNQ9NQW6 1124 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ARHGEF4Q9NR80 690 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 TPX2Q9ULW0 747 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 ATP8A1Q9Y2Q0 1164 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 HEY1Q9Y5J3 304 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 CDY1Q9Y6F8 540 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 A0A1W2PQH9 124 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 H0YGN5 161 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 H7C0C1 242 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 I6L893 689 aaPredicted RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 EEF2KO00418 725 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 IRAK2O43187 625 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 ZSCAN5DPP0CG00 497 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 LAG3P18627 525 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 AMPD1P23109 780 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 YWHAQP27348 245 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 RPL22P35268 128 aaKnown RBP9.99□□□□□ -0.81
MDH1-215ENST00000539945 ATP5OP48047 213 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 GPR15P49685 360 aa9.99□□□□□ -0.81
MDH1-215ENST00000539945 PGFP49763 221 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms