RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 SELENOOQ9BVL4 669 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 EDEM3Q9BZQ6 932 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 PITHD1Q9GZP4 211 aaPredicted RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 WNT5BQ9H1J7 359 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 NKX2-4Q9H2Z4 354 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 NHEJ1Q9H9Q4 299 aaPredicted RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 RNPEPL1Q9HAU8 725 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 PTPRHQ9HD43 1115 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 PALMDQ9NP74 551 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 GPRC5CQ9NQ84 441 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 GPRC5BQ9NZH0 403 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 SEPT9Q9UHD8 586 aaPredicted RBP12.98□□□□□ -0.33
DDX55-206ENST00000539934 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 ERVK-11Q9UQG0 969 aa12.98□□□□□ -0.33
DDX55-206ENST00000539934 A0A0U1RQJ8 604 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 C1orf232A0A0U1RR37 186 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 LRRC53A6NM62 1247 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 RGS13O14921 159 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ADCY6O43306 1168 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ZBTB14O43829 449 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ZNF862O60290 1169 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 TIMP1P01033 207 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ZNF865P0CJ78 1059 aaPredicted RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 CYP2C18P33260 490 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 CYP2J2P51589 502 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 SP2Q02086 613 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 OTOP2Q7RTS6 562 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 STRA6Q9BX79 667 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 MROH8Q9H579 483 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 NLRC4Q9NPP4 1024 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 MRPL39Q9NYK5 338 aaKnown RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 CEP72Q9P209 647 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 PCDHGA8Q9Y5G5 932 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 USP34Q70CQ2 3546 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 H3BUI4 141 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 RFXAPO00287 272 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 KPNA5O15131 536 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 C6orf222P0C671 652 aaPredicted RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 PTPN9P43378 593 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ETV1P50549 477 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ABHD15Q6UXT9 468 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 MARK2Q7KZI7 788 aaKnown RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 CYP2U1Q7Z449 544 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ARFGAP2Q8N6H7 521 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 CCNYL1Q8N7R7 359 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 ENDOVQ8N8Q3 282 aaKnown RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 ENKURQ8TC29 256 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 UCMAQ8WVF2 138 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 RPRD1AQ96P16 312 aaPredicted RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 COQ7Q99807 217 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 GRIP2Q9C0E4 1043 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 UCK1Q9HA47 277 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 CERS4Q9HA82 394 aa12.97□□□□□ -0.33
DDX55-206ENST00000539934 PAQR5Q9NXK6 330 aaPredicted RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
DDX55-206ENST00000539934 UMODL1Q5DID0 1318 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 ANO9A1A5B4 782 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 MIF4GDA9UHW6 222 aaKnown RBP12.96□□□□□ -0.33
DDX55-206ENST00000539934 XPO1O14980 1071 aaKnown RBP12.96□□□□□ -0.33
DDX55-206ENST00000539934 TFPTP0C1Z6 253 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.33
DDX55-206ENST00000539934 VAMP1P23763 118 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.33
DDX55-206ENST00000539934 GPR85P60893 370 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 ENPEPQ07075 957 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 SF3B4Q15427 424 aaKnown RBP eCLIP12.96□□□□□ -0.331e-13■■■■■ 68.7
DDX55-206ENST00000539934 MFSD5Q6N075 450 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 POMZP3Q6PJE2 187 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 B3GNT6Q6ZMB0 384 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 KCTD20Q7Z5Y7 419 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 PYROXD1Q8WU10 500 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 BAP1Q92560 729 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 SP140LQ9H930 580 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 ENAMQ9NRM1 1142 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 DMGDHQ9UI17 866 aaKnown RBP12.96□□□□□ -0.33
DDX55-206ENST00000539934 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 BRWD1Q9NSI6 2320 aa12.96□□□□□ -0.33
DDX55-206ENST00000539934 SLC16A4O15374 487 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 EXOC3O60645 756 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 AKR1A1P14550 325 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.34
DDX55-206ENST00000539934 EDNRBP24530 442 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 GRK2P25098 689 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 DNAJB1P25685 340 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 CTHP32929 405 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 HSPA13P48723 471 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 SEC24CP53992 1094 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 P2RX3P56373 397 aa12.96□□□□□ -0.34
DDX55-206ENST00000539934 DMP1Q13316 513 aaPredicted RBP12.96□□□□□ -0.34
DDX55-206ENST00000539934 ITIH4Q14624 930 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms