RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 LRRC43Q8N309 656 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 C3orf58Q8NDZ4 430 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 CLEC4CQ8WTT0 213 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 ARNTL2Q8WYA1 636 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 KHSRPQ92945 711 aaKnown RBP eCLIP18.88■□□□□ 0.61
COPS7A-210ENST00000539735 PAIP2Q9BPZ3 127 aaKnown RBP18.88■□□□□ 0.61
COPS7A-210ENST00000539735 PAAF1Q9BRP4 392 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 ZNF670Q9BS34 389 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 C17orf80Q9BSJ5 609 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 HCSTQ9UBK5 93 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 TMEM265A0A087WTH1 108 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 H7C0C1 242 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 CLDN5O00501 218 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 GABRDO14764 452 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 APOL1O14791 398 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 MGRN1O60291 552 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 RPA3P35244 121 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-210ENST00000539735 MSH2P43246 934 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 ATP5OP48047 213 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 ATP11AP98196 1134 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 SNCBQ16143 134 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 SLC9A4Q6AI14 798 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 Q7L0L9 218 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 ZC3H18Q86VM9 953 aaKnown RBP18.88■□□□□ 0.61
COPS7A-210ENST00000539735 PLD5Q8N7P1 536 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 MZB1Q8WU39 189 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 FAM172AQ8WUF8 416 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 RSPH1Q8WYR4 309 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 FAF2Q96CS3 445 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 CYTH2Q99418 400 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 PCDH18Q9HCL0 1135 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 DDX43Q9NXZ2 648 aaKnown RBP18.88■□□□□ 0.61
COPS7A-210ENST00000539735 KANSL3Q9P2N6 904 aa18.88■□□□□ 0.61
COPS7A-210ENST00000539735 TIMM13Q9Y5L4 95 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-210ENST00000539735 BCLAF3A2AJT9 711 aaKnown RBP18.87■□□□□ 0.61
COPS7A-210ENST00000539735 CHUKO15111 745 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 FAM163BP0C2L3 166 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 KRT4P19013 534 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 IL4RP24394 825 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 RPL9P32969 192 aaKnown RBP18.87■□□□□ 0.61
COPS7A-210ENST00000539735 MNAT1P51948 309 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 SWT1Q5T5J6 900 aaKnown RBP18.87■□□□□ 0.61
COPS7A-210ENST00000539735 HHATQ5VTY9 493 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 C4orf22Q6V702 233 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 ARCQ7LC44 396 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 DEFB123Q8N688 67 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 MAGEC3Q8TD91 643 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 LRRC8CQ8TDW0 803 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 DCAKDQ8WVC6 231 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 HNRNPABQ99729 332 aaKnown RBP18.87■□□□□ 0.61
COPS7A-210ENST00000539735 USP29Q9HBJ7 922 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 TBC1D13Q9NVG8 400 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 PTPRSQ13332 1948 aa18.87■□□□□ 0.61
COPS7A-210ENST00000539735 A0A1W2PPM1 405 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 TM9SF1O15321 606 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 CTNNB1P35222 781 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 SKIV2L2P42285 1042 aaKnown RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 PTPN9P43378 593 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 ACADSBP45954 432 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 BCAR1P56945 870 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 NCALDP61601 193 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 ELF3P78545 371 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 EFTUD2Q15029 972 aaKnown RBP eCLIP18.86■□□□□ 0.612e-8■■■■■ 57.6
COPS7A-210ENST00000539735 UPP1Q16831 310 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 MDH1BQ5I0G3 518 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 KIAA0319Q5VV43 1072 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 PQLC3Q8N755 202 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 CLP1Q92989 425 aaKnown RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 NGRNQ9NPE2 291 aaKnown RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 CYLDQ9NQC7 956 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 TEX264Q9Y6I9 313 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 TRANK1O15050 2925 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 ELK3P41970 407 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 MAGEA6P43360 314 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 RPL34P49207 117 aaKnown RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 ERVK-21P61565 698 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 SLC1A5Q15758 541 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 SCYL2Q6P3W7 929 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 C1orf228Q6PIY5 440 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 TMEM86AQ8N2M4 240 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 HSFY1Q96LI6 401 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 FAM193BQ96PV7 902 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 SNRNP25Q9BV90 132 aaKnown RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 DUSP16Q9BY84 665 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 ECT2Q9H8V3 914 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 PNPLA8Q9NP80 782 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 PHTF1Q9UMS5 762 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 CHMP2BQ9UQN3 213 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 RWDD3Q9Y3V2 267 aa18.86■□□□□ 0.61
COPS7A-210ENST00000539735 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-210ENST00000539735 XPO1O14980 1071 aaKnown RBP18.85■□□□□ 0.61
COPS7A-210ENST00000539735 EDF1O60869 148 aaKnown RBP18.85■□□□□ 0.61
COPS7A-210ENST00000539735 BMPR1AP36894 532 aa18.85■□□□□ 0.61
COPS7A-210ENST00000539735 LHX1P48742 406 aa18.85■□□□□ 0.61
COPS7A-210ENST00000539735 SLC8A3P57103 927 aa18.85■□□□□ 0.61
COPS7A-210ENST00000539735 DNAJC3Q13217 504 aa18.85■□□□□ 0.61
COPS7A-210ENST00000539735 GRIN2CQ14957 1233 aa18.85■□□□□ 0.61
COPS7A-210ENST00000539735 TIGD5Q53EQ6 642 aa18.85■□□□□ 0.61
COPS7A-210ENST00000539735 FAM47EQ6ZV65 393 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms