RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 BRMS1LQ5PSV4 323 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 PIK3R6Q5UE93 754 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 RAD9BQ6WBX8 426 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 ZNF852Q6ZMS4 543 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 TMEM139Q8IV31 216 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 CCDC170Q8IYT3 715 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 PBXIP1Q96AQ6 731 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 MYEOVQ96EZ4 313 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 BAG1Q99933 345 aaPredicted RBP13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 DDX50Q9BQ39 737 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 NUP85Q9BW27 656 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 FBRSL1Q9HCM7 1045 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 LTB4R2Q9NPC1 389 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 MARK1Q9P0L2 795 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 MTF2Q9Y483 593 aaPredicted RBP13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 SNX10Q9Y5X0 201 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 MUC3AQ02505 3323 aa13.18□□□□□ -0.3
TSPAN9-207ENST00000539631 KMT2EQ8IZD2 1858 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 PAGE1O75459 146 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 LCA5LO95447 670 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 PENKP01210 267 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 CYBBP04839 570 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 TMEM253P0C7T8 217 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 TACR2P21452 398 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 TARSP26639 723 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 GGCXP38435 758 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 MAGEA1P43355 309 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 MS4A13Q5J8X5 152 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 CHSY1Q86X52 802 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 ETFBKMTQ8IXQ9 262 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 LGI2Q8N0V4 545 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 DDI1Q8WTU0 396 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 CTNNBL1Q8WYA6 563 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 CD101Q93033 1021 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 BTBD6Q96KE9 485 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 PRICKLE1Q96MT3 831 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 P2RY13Q9BPV8 354 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 SIK2Q9H0K1 926 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 TMEM51Q9NW97 253 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 HS3ST4Q9Y661 456 aa13.17□□□□□ -0.3
TSPAN9-207ENST00000539631 FAM170BA6NMN3 283 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 TRIM24O15164 1050 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 PI15O43692 258 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 CACNG3O60359 315 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 GPR37L1O60883 481 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 TBL1XO60907 577 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 TULP3O75386 442 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 NDUFA10O95299 355 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 GSDMDP57764 484 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 KDSRQ06136 332 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 MESP2Q0VG99 397 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 TMEM196Q5HYL7 178 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 C10orf76Q5T2E6 689 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 FSTL4Q6MZW2 842 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 SCYL2Q6P3W7 929 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 C14orf80Q86SX3 495 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 CFAP52Q8N1V2 620 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 FNIP1Q8TF40 1166 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 XPO6Q96QU8 1125 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 PNKPQ96T60 521 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 STIM2Q9P246 746 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 CTTNBP2NLQ9P2B4 639 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 CLEC4EQ9ULY5 219 aa13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 MRPS17Q9Y2R5 130 aaKnown RBP13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
TSPAN9-207ENST00000539631 DOCK4Q8N1I0 1966 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 F5H5T6 163 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 EGFP01133 1207 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 DESP17661 470 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 HOXD9P28356 352 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 ADRA1BP35368 520 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 EIF2DP41214 584 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 RPS24P62847 133 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 MTA1Q13330 715 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 FZD5Q13467 585 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 AUHQ13825 339 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 GSE1Q14687 1217 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 SPA17Q15506 151 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 TMEM31Q5JXX7 168 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 DAB2IPQ5VWQ8 1189 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 CCDC105Q8IYK2 499 aa13.15□□□□□ -0.3
TSPAN9-207ENST00000539631 PHTF2Q8N3S3 785 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms