RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 FYB2Q5VWT5 728 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 ASTLQ6HA08 431 aaPredicted RBP13.48□□□□□ -0.25
CCDC42-202ENST00000539522 FAM72DQ6L9T8 149 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 RFWD3Q6PCD5 774 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 FAM72BQ86X60 149 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 SFTPA1Q8IWL2 248 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 PHTF2Q8N3S3 785 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 ZNF564Q8TBZ8 553 aaPredicted RBP13.48□□□□□ -0.25
CCDC42-202ENST00000539522 AZIN2Q96A70 460 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 TKTL2Q9H0I9 626 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 BRD9Q9H8M2 597 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 RRAGDQ9NQL2 400 aaPredicted RBP13.48□□□□□ -0.25
CCDC42-202ENST00000539522 ANAPC7Q9UJX3 599 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 STAP1Q9ULZ2 295 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 HS3ST4Q9Y661 456 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 SCINQ9Y6U3 715 aa13.48□□□□□ -0.25
CCDC42-202ENST00000539522 LATS1O95835 1130 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 MOCS2O96007 188 aaPredicted RBP13.47□□□□□ -0.25
CCDC42-202ENST00000539522 PDGFBP01127 241 aaPredicted RBP13.47□□□□□ -0.25
CCDC42-202ENST00000539522 PENKP01210 267 aaPredicted RBP13.47□□□□□ -0.25
CCDC42-202ENST00000539522 PSMA2P25787 234 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 GJA4P35212 333 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 OPRD1P41143 372 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 ARHGAP25P42331 645 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 SLC6A11P48066 632 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 PDGFRLQ15198 375 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 CA9Q16790 459 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 ADGRF1Q5T601 910 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 NUGGCQ68CJ6 796 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 ETFBKMTQ8IXQ9 262 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 PYROXD2Q8N2H3 581 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 CPXM2Q8N436 756 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 NIPA2Q8N8Q9 360 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 WFDC5Q8TCV5 224 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 CTNNBL1Q8WYA6 563 aaPredicted RBP13.47□□□□□ -0.25
CCDC42-202ENST00000539522 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 IRF7Q92985 503 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 IGSF8Q969P0 613 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 GOLPH3Q9H4A6 298 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 MRPL47Q9HD33 250 aaKnown RBP13.47□□□□□ -0.25
CCDC42-202ENST00000539522 C11orf16Q9NQ32 467 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 LZTFL1Q9NQ48 299 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 SPHK2Q9NRA0 654 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC42-202ENST00000539522 MARK1Q9P0L2 795 aa13.47□□□□□ -0.25
CCDC42-202ENST00000539522 MUC22E2RYF6 1773 aaPredicted RBP13.47□□□□□ -0.25
CCDC42-202ENST00000539522 PI4K2BG5E9Z4 385 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 KIF5CO60282 957 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 TSPAN3O60637 253 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 TNNT1P13805 278 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 MIPP30301 263 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 CCR1P32246 355 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 ADRA1BP35368 520 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 IFNAR2P48551 515 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 KPNA1P52294 538 aaPredicted RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 HADHBP55084 474 aaKnown RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 TAS2R40P59535 323 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 ETF1P62495 437 aaKnown RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 SLC25A11Q02978 314 aaKnown RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 SEMA3BQ13214 749 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 FZD5Q13467 585 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 C5orf22Q49AR2 442 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 BRMS1LQ5PSV4 323 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 DNTTIP2Q5QJE6 756 aaKnown RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 MANEALQ5VSG8 457 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 RAP1GAP2Q684P5 730 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 TPGS1Q6ZTW0 290 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 YAF2Q8IY57 180 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 RNF10Q8N5U6 811 aaKnown RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 RFFLQ8WZ73 363 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 EDAQ92838 391 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 OTUB2Q96DC9 234 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 LMLNQ96KR4 655 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 BTN2A3PQ96KV6 586 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 DCLK3Q9C098 648 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 WDCPQ9H6R7 721 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 GPATCH2LQ9NWQ4 482 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 THG1LQ9NWX6 298 aaKnown RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 PLK2Q9NYY3 685 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 CTTNBP2NLQ9P2B4 639 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 TBC1D14Q9P2M4 693 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 UVRAGQ9P2Y5 699 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 ZNF212Q9UDV6 495 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 HCN2Q9UL51 889 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 FZD10Q9ULW2 581 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 CA14Q9ULX7 337 aa13.46□□□□□ -0.25
CCDC42-202ENST00000539522 MTF2Q9Y483 593 aaPredicted RBP13.46□□□□□ -0.25
CCDC42-202ENST00000539522 CHD5Q8TDI0 1954 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 BTNL10A8MVZ5 291 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 SPECC1L-ADORA2AF8WAN1 911 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 HOXC11O43248 304 aaPredicted RBP13.45□□□□□ -0.26
CCDC42-202ENST00000539522 DCXO43602 365 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 PROSCO94903 275 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 F9P00740 461 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 CISD3P0C7P0 127 aa13.45□□□□□ -0.26
CCDC42-202ENST00000539522 TACR2P21452 398 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms