RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PDGFRAP16234 1089 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 DRD1P21728 446 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 SLC11A2P49281 568 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 CXCR3P49682 368 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 IRAK1P51617 712 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 RPS24P62847 133 aaKnown RBP16.34■□□□□ 0.21
RPAIN-206ENST00000539417 DEUP1Q05D60 604 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 TRIM14Q14142 442 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 CDO1Q16878 200 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 DGKKQ5KSL6 1271 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 DNAJC24Q6P3W2 148 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 TSSK4Q6SA08 328 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 ARCQ7LC44 396 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 C14orf80Q86SX3 495 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 CFAP52Q8N1V2 620 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 OR8K1Q8NGG5 319 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 RNF34Q969K3 372 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 PGAP3Q96FM1 320 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-206ENST00000539417 MCEEQ96PE7 176 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 PRMT1Q99873 361 aaKnown RBP16.34■□□□□ 0.21
RPAIN-206ENST00000539417 ISCUQ9H1K1 167 aa16.34■□□□□ 0.21
RPAIN-206ENST00000539417 SPATA6Q9NWH7 488 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-206ENST00000539417 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPAIN-206ENST00000539417 CACNA1IQ9P0X4 2223 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 SIGLEC16A6NMB1 481 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 PRRT4C9JH25 899 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 TBL1XO60907 577 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 RTN2O75298 545 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 ENDOD1O94919 500 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 APOEP02649 317 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 TACR2P21452 398 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 CCR1P32246 355 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 GBP1P32455 592 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 EIF2DP41214 584 aaKnown RBP16.33■□□□□ 0.2
RPAIN-206ENST00000539417 SATB1Q01826 763 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 MAMLD1Q13495 774 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 LRRC32Q14392 662 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 PPP2R5DQ14738 602 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 GEN1Q17RS7 908 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 ASTE1Q2TB18 679 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-206ENST00000539417 MS4A13Q5J8X5 152 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 CIR1Q86X95 450 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-206ENST00000539417 FAM131BQ86XD5 332 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 TC2NQ8N9U0 490 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 TMA16Q96EY4 203 aaKnown RBP16.33■□□□□ 0.2
RPAIN-206ENST00000539417 BTN2A3PQ96KV6 586 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 TKTL2Q9H0I9 626 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 ARHGEF38Q9NXL2 777 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 RRN3Q9NYV6 651 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 STIM2Q9P246 746 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 DEC1Q9P2X7 70 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 STAP1Q9ULZ2 295 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 HS3ST4Q9Y661 456 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 BZW2Q9Y6E2 419 aaKnown RBP16.33■□□□□ 0.2
RPAIN-206ENST00000539417 MYO15AQ9UKN7 3530 aa16.33■□□□□ 0.2
RPAIN-206ENST00000539417 A0A0A0MRY4 1105 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 H0Y858 1186 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 CCP110O43303 1012 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 PAGE1O75459 146 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 APODP05090 189 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 DGKGP49619 791 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 GFPT1Q06210 699 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-206ENST00000539417 ZNF252P-AS1Q0IIN9 211 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 ANGPT1Q15389 498 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 MPPE1Q53F39 396 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 C2orf27AQ580R0 203 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 GRAMD4Q6IC98 578 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 PLEKHA7Q6IQ23 1121 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 CHSY1Q86X52 802 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 C1orf210Q8IVY1 113 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 LGI2Q8N0V4 545 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 ATP6V0D2Q8N8Y2 350 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 TERB1Q8NA31 727 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 RPLP0P6Q8NHW5 317 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 IGSF8Q969P0 613 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 MRFAP1L1Q96HT8 127 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 VCPIP1Q96JH7 1222 aa16.32■□□□□ 0.2
RPAIN-206ENST00000539417 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
RPAIN-206ENST00000539417 CNOT8Q9UFF9 292 aaKnown RBP16.32■□□□□ 0.2
RPAIN-206ENST00000539417 AKR1B15C9JRZ8 316 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-206ENST00000539417 CYBBP04839 570 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 ABCB4P21439 1286 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 GPD1P21695 349 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 SDC4P31431 198 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 RDXP35241 583 aaKnown RBP16.31■□□□□ 0.2
RPAIN-206ENST00000539417 GRIA2P42262 883 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 PTPN9P43378 593 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 KIR2DL1P43626 348 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-206ENST00000539417 HDAC4P56524 1084 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 TMEM215Q68D42 235 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 RNF43Q68DV7 783 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 DRC7Q8IY82 874 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 USP33Q8TEY7 942 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 FAM172AQ8WUF8 416 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 CENPIQ92674 756 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-206ENST00000539417 ZNF653Q96CK0 615 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 ARHGEF26Q96DR7 871 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 WDCPQ9H6R7 721 aa16.31■□□□□ 0.2
RPAIN-206ENST00000539417 MYO1AQ9UBC5 1043 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms