RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CLNS1AP54105 237 aaKnown RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 AIF1P55008 147 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 CDH6P55285 790 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 EIF3BP55884 814 aaKnown RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 PITX1P78337 314 aaPredicted RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 SCAPQ12770 1279 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 SMARCB1Q12824 385 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 EIF4EBP2Q13542 120 aaPredicted RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 RIPK1Q13546 671 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 SNX1Q13596 522 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 BYSLQ13895 437 aaKnown RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 TFDP2Q14188 446 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 NOMO1Q15155 1222 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 CA9Q16790 459 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 ATG2AQ2TAZ0 1938 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 SLC9A4Q6AI14 798 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 RHBDF2Q6PJF5 856 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 VSTM1Q6UX27 236 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 RNF19BQ6ZMZ0 732 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 MAP7D3Q8IWC1 876 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 ALLCQ8N6M5 410 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 TTC9BQ8N6N2 239 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 ANKS4BQ8N8V4 417 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 MAB21L3Q8N8X9 362 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 ZNF461Q8TAF7 563 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 GIPC2Q8TF65 315 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 SHROOM3Q8TF72 1996 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 GLMNQ92990 594 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 ART4Q93070 314 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 NTAN1Q96AB6 310 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 C8orf48Q96LL4 319 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 RNF157Q96PX1 679 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 DPH5Q9H2P9 285 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 CENPHQ9H3R5 247 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 WDR6Q9NNW5 1121 aaKnown RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 IL37Q9NZH6 218 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 WHRNQ9P202 907 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 SLC12A6Q9UHW9 1150 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 LZTS1Q9Y250 596 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 PLAAQ9Y263 795 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 YBX2Q9Y2T7 364 aaKnown RBP9.16□□□□□ -0.94
DDB1-213ENST00000539332 REV3LO60673 3130 aa9.16□□□□□ -0.94
DDB1-213ENST00000539332 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.15□□□□□ -0.94
DDB1-213ENST00000539332 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.15□□□□□ -0.94
DDB1-213ENST00000539332 GPR37O15354 613 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 PPFIA2O75334 1257 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 ABLIM3O94929 683 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 IGLV3-25P01717 112 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 USP17L7P0C7H9 530 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 BMP8BP34820 402 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 GRIK1P39086 918 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 SULT1E1P49888 294 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 ATXN1P54253 815 aaKnown RBP9.15□□□□□ -0.94
DDB1-213ENST00000539332 PPP2R2AP63151 447 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 MMRN1Q13201 1228 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 HLTFQ14527 1009 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDB1-213ENST00000539332 DCAF6Q58WW2 860 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 ZC3H12AQ5D1E8 599 aaKnown RBP9.15□□□□□ -0.94
DDB1-213ENST00000539332 SYPL2Q5VXT5 272 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 KAZNQ674X7 775 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 TMC3Q7Z5M5 1100 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 CCDC185Q8N715 623 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 PQLC3Q8N755 202 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 ACTL9Q8TC94 416 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 FBXO25Q8TCJ0 367 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 SPPL2BQ8TCT7 592 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 C2orf15Q8WU43 125 aaKnown RBP9.15□□□□□ -0.94
DDB1-213ENST00000539332 ANKRD27Q96NW4 1050 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 TGS1Q96RS0 853 aaKnown RBP9.15□□□□□ -0.94
DDB1-213ENST00000539332 TRIM62Q9BVG3 475 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 PBX4Q9BYU1 374 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 CRISPLD1Q9H336 500 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDB1-213ENST00000539332 GPATCH2LQ9NWQ4 482 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 FNIP2Q9P278 1114 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 FZD10Q9ULW2 581 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 AP4E1Q9UPM8 1137 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 CHD5Q8TDI0 1954 aa9.15□□□□□ -0.94
DDB1-213ENST00000539332 DOCK6Q96HP0 2047 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 CCDC189A1A4V9 331 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 FAM92AA1XBS5 289 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 TEX28O15482 410 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RB1P06400 928 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 CNPP09543 421 aaKnown RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 TGM2P21980 687 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 DNAJB1P25685 340 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 SCTRP47872 440 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RGS19P49795 217 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SLC5A3P53794 718 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 ERVFC1P60507 584 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 ERVK-21P61565 698 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 OTUD4Q01804 1114 aaKnown RBP9.14□□□□□ -0.95
DDB1-213ENST00000539332 CREMQ03060 361 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 UBE3AQ05086 875 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 DUSP4Q13115 394 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 SEMA3BQ13214 749 aa9.14□□□□□ -0.95
DDB1-213ENST00000539332 RAB33AQ14088 237 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms