RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LIPMQ5VYY2 423 aa5.9□□□□□ -1.46
CCDC7-209ENST00000539197 SPATA2LQ8IUW3 424 aaPredicted RBP5.9□□□□□ -1.46
CCDC7-209ENST00000539197 NUDCD2Q8WVJ2 157 aa5.9□□□□□ -1.46
CCDC7-209ENST00000539197 LRRC46Q96FV0 321 aa5.9□□□□□ -1.46
CCDC7-209ENST00000539197 MED30Q96HR3 178 aa5.9□□□□□ -1.46
CCDC7-209ENST00000539197 STRBPQ96SI9 672 aaKnown RBP5.9□□□□□ -1.46
CCDC7-209ENST00000539197 WDR83Q9BRX9 315 aaKnown RBP5.9□□□□□ -1.46
CCDC7-209ENST00000539197 ERVK-5Q9HDB9 667 aa5.9□□□□□ -1.46
CCDC7-209ENST00000539197 INSL5Q9Y5Q6 135 aa5.9□□□□□ -1.46
CCDC7-209ENST00000539197 TRIP12Q14669 1992 aaPredicted RBP5.89□□□□□ -1.47
CCDC7-209ENST00000539197 CCNT2O60583 730 aaKnown RBP5.89□□□□□ -1.47
CCDC7-209ENST00000539197 HRGP04196 525 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 FGF3P11487 239 aaPredicted RBP5.89□□□□□ -1.47
CCDC7-209ENST00000539197 RPL17P18621 184 aaKnown RBP5.89□□□□□ -1.47
CCDC7-209ENST00000539197 DMWDQ09019 674 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 SEMA5AQ13591 1074 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 KRTAP27-1Q3LI81 207 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 KLHDC7AQ5VTJ3 777 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 ISM2Q6H9L7 571 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 OR52L2PQ8NGH6 319 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 CENPIQ92674 756 aaPredicted RBP5.89□□□□□ -1.47
CCDC7-209ENST00000539197 ELOVL1Q9BW60 279 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 ZBTB26Q9HCK0 441 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 RXFP3Q9NSD7 469 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 GJB4Q9NTQ9 266 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 TMOD4Q9NZQ9 345 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 CORO2BQ9UQ03 480 aa5.89□□□□□ -1.47
CCDC7-209ENST00000539197 FRMPD2Q68DX3 1309 aaPredicted RBP5.89□□□□□ -1.47
CCDC7-209ENST00000539197 DPPA5A6NC42 116 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 SGPL1O95470 568 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 SLC8A1P32418 973 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 LTBQ06643 244 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 SEMA3BQ13214 749 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 ANXA2RQ3ZCQ2 193 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 KRT28Q7Z3Y7 464 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 TMEM174Q8WUU8 243 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 ASB12Q8WXK4 309 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 INPP5DQ92835 1189 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 PMM1Q92871 262 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 GPR78Q96P69 363 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 MDFICQ9P1T7 246 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 EID1Q9Y6B2 187 aa5.88□□□□□ -1.47
CCDC7-209ENST00000539197 EVPLQ92817 2033 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 RPS10-NUDT3A0A1W2PQS6 291 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 THAP12O43422 761 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 GAD2Q05329 585 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 NFATC4Q14934 902 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 PLEKHG6Q3KR16 790 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 ACSM6Q6P461 480 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 ZNF474Q6S9Z5 364 aaPredicted RBP5.87□□□□□ -1.47
CCDC7-209ENST00000539197 ZFPM2Q8WW38 1151 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 OVCA2Q8WZ82 227 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 CDCP1Q9H5V8 836 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 TASP1Q9H6P5 420 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 SNX13Q9Y5W8 968 aa5.87□□□□□ -1.47
CCDC7-209ENST00000539197 COQ9O75208 318 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 RFPL3SP0C7P2 107 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 RHCEP18577 417 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 MST1P26927 711 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 ENTPD1P49961 510 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 EGR4Q05215 589 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 KEAP1Q14145 624 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 RAP1GAP2Q684P5 730 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 CYB5RLQ6IPT4 315 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 C16orf89Q6UX73 402 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 SLC39A5Q6ZMH5 540 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 TRILQ7L0X0 811 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 DDIASQ8IXT1 998 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 CLASRPQ8N2M8 674 aaKnown RBP5.86□□□□□ -1.47
CCDC7-209ENST00000539197 FAM47BQ8NA70 645 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 UNKQ9C0B0 810 aaKnown RBP5.86□□□□□ -1.47
CCDC7-209ENST00000539197 BTBD1Q9H0C5 482 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 WNT16Q9UBV4 365 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 B3GNT3Q9Y2A9 372 aa5.86□□□□□ -1.47
CCDC7-209ENST00000539197 CIITAP33076 1130 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 DAG1Q14118 895 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 FAXCQ5TGI0 409 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 HMBOX1Q6NT76 420 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 CCDC144NLQ6NUI1 221 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 TLDC1Q6P9B6 456 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 PIK3AP1Q6ZUJ8 805 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 GPSM1Q86YR5 675 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 LAS2Q8IYD9 372 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 IQCDQ96DY2 449 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 HIF1ANQ9NWT6 349 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
CCDC7-209ENST00000539197 ZSCAN9O15535 394 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-209ENST00000539197 IFNA2P01563 188 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 ACAA1P09110 424 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-209ENST00000539197 GSTM5P46439 218 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 GBX1Q14549 363 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 LRIG3Q6UXM1 1119 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 KIAA0408Q6ZU52 694 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 CTU1Q7Z7A3 348 aaKnown RBP5.84□□□□□ -1.47
CCDC7-209ENST00000539197 FAM177A1Q8N128 213 aaPredicted RBP5.84□□□□□ -1.47
CCDC7-209ENST00000539197 ELP5Q8TE02 316 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 GLMPQ8WWB7 406 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 PHKBQ93100 1093 aa5.84□□□□□ -1.47
CCDC7-209ENST00000539197 CD93Q9NPY3 652 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms